Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
AP3B1O00203 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP3B1O00203 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP3B1O00203 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.25■□□□□ 0.67
AP3B1O00203 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
AP3B1O00203 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.25■□□□□ 0.67
AP3B1O00203 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.25■□□□□ 0.67
AP3B1O00203 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
AP3B1O00203 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.25■□□□□ 0.67
AP3B1O00203 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.25■□□□□ 0.67
AP3B1O00203 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.25■□□□□ 0.67
AP3B1O00203 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP3B1O00203 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.25■□□□□ 0.67
AP3B1O00203 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP3B1O00203 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP3B1O00203 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
AP3B1O00203 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.25■□□□□ 0.67
AP3B1O00203 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
AP3B1O00203 KRT8P41-201ENST00000533985 1514 ntBASIC19.25■□□□□ 0.67
AP3B1O00203 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP3B1O00203 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP3B1O00203 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
AP3B1O00203 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.25■□□□□ 0.67
AP3B1O00203 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.25■□□□□ 0.67
AP3B1O00203 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP3B1O00203 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.24■□□□□ 0.67
AP3B1O00203 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP3B1O00203 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP3B1O00203 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP3B1O00203 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP3B1O00203 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP3B1O00203 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP3B1O00203 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
AP3B1O00203 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP3B1O00203 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP3B1O00203 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP3B1O00203 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.24■□□□□ 0.67
AP3B1O00203 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.24■□□□□ 0.67
AP3B1O00203 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP3B1O00203 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP3B1O00203 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.24■□□□□ 0.67
AP3B1O00203 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
AP3B1O00203 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.24■□□□□ 0.67
AP3B1O00203 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
AP3B1O00203 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP3B1O00203 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP3B1O00203 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP3B1O00203 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP3B1O00203 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.24■□□□□ 0.67
AP3B1O00203 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP3B1O00203 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
AP3B1O00203 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
AP3B1O00203 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.23■□□□□ 0.67
AP3B1O00203 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP3B1O00203 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.23■□□□□ 0.67
AP3B1O00203 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
AP3B1O00203 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
AP3B1O00203 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP3B1O00203 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP3B1O00203 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP3B1O00203 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.23■□□□□ 0.67
AP3B1O00203 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP3B1O00203 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP3B1O00203 NIFKP9-201ENST00000419265 221 ntBASIC19.23■□□□□ 0.67
AP3B1O00203 KSR1P1-201ENST00000446298 240 ntBASIC19.23■□□□□ 0.67
AP3B1O00203 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP3B1O00203 PRSS44-201ENST00000515154 1146 ntBASIC19.23■□□□□ 0.67
AP3B1O00203 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
AP3B1O00203 AC006058.3-201ENST00000606217 1069 ntBASIC19.23■□□□□ 0.67
AP3B1O00203 AC073648.6-201ENST00000641589 218 ntBASIC19.23■□□□□ 0.67
AP3B1O00203 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.23■□□□□ 0.67
AP3B1O00203 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.23■□□□□ 0.67
AP3B1O00203 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP3B1O00203 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP3B1O00203 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP3B1O00203 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.23■□□□□ 0.67
AP3B1O00203 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.23■□□□□ 0.67
AP3B1O00203 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.23■□□□□ 0.67
AP3B1O00203 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP3B1O00203 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
AP3B1O00203 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP3B1O00203 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP3B1O00203 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
AP3B1O00203 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.22■□□□□ 0.67
AP3B1O00203 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP3B1O00203 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
AP3B1O00203 AP002982.1-201ENST00000492365 877 ntBASIC19.22■□□□□ 0.67
AP3B1O00203 Z85996.1-201ENST00000494644 937 ntBASIC19.22■□□□□ 0.67
AP3B1O00203 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.22■□□□□ 0.67
AP3B1O00203 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.22■□□□□ 0.67
AP3B1O00203 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.22■□□□□ 0.67
AP3B1O00203 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.22■□□□□ 0.67
AP3B1O00203 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP3B1O00203 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.22■□□□□ 0.67
AP3B1O00203 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP3B1O00203 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP3B1O00203 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
AP3B1O00203 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
AP3B1O00203 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP3B1O00203 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms