Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 AC026202.3-201ENST00000600805 1127 ntBASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 HYMAI-201ENST00000635591 3347 ntBASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 AL136379.1-201ENST00000623471 2642 ntBASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 ECEL1P2-201ENST00000461596 1295 ntBASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 AL592293.1-201ENST00000502889 1188 ntBASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 AC079089.2-201ENST00000531211 1277 ntBASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 AC060814.1-201ENST00000554326 538 ntBASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 GFER-205ENST00000569451 517 ntTSL 5 BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 GAK-223ENST00000628912 497 ntTSL 5 BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 OR2I1P-210ENST00000642037 4691 ntBASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 TET3-201ENST00000305799 5174 ntTSL 5 BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CHKB-CPT1BH3BT56 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
CHKB-CPT1BH3BT56 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC10.57□□□□□ -0.72
CHKB-CPT1BH3BT56 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CHKB-CPT1BH3BT56 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
CHKB-CPT1BH3BT56 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
CHKB-CPT1BH3BT56 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CHKB-CPT1BH3BT56 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CHKB-CPT1BH3BT56 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC10.57□□□□□ -0.72
CHKB-CPT1BH3BT56 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
CHKB-CPT1BH3BT56 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CHKB-CPT1BH3BT56 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CHKB-CPT1BH3BT56 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CHKB-CPT1BH3BT56 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC10.57□□□□□ -0.72
CHKB-CPT1BH3BT56 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CHKB-CPT1BH3BT56 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
CHKB-CPT1BH3BT56 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
CHKB-CPT1BH3BT56 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CHKB-CPT1BH3BT56 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC10.57□□□□□ -0.72
CHKB-CPT1BH3BT56 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CHKB-CPT1BH3BT56 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CHKB-CPT1BH3BT56 AC004448.1-201ENST00000458332 883 ntBASIC10.57□□□□□ -0.72
CHKB-CPT1BH3BT56 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
CHKB-CPT1BH3BT56 LSM7-203ENST00000585409 512 ntTSL 2 BASIC10.57□□□□□ -0.72
CHKB-CPT1BH3BT56 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms