Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC13.54□□□□□ -0.24
LINC01549A6NIU2 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01549A6NIU2 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01549A6NIU2 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01549A6NIU2 ANO7L1-203ENST00000602586 1720 ntBASIC13.54□□□□□ -0.24
LINC01549A6NIU2 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
LINC01549A6NIU2 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01549A6NIU2 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01549A6NIU2 AC099398.1-201ENST00000567919 2776 ntBASIC13.54□□□□□ -0.24
LINC01549A6NIU2 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01549A6NIU2 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01549A6NIU2 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01549A6NIU2 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01549A6NIU2 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01549A6NIU2 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01549A6NIU2 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC13.54□□□□□ -0.24
LINC01549A6NIU2 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC13.54□□□□□ -0.24
LINC01549A6NIU2 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
LINC01549A6NIU2 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC13.54□□□□□ -0.24
LINC01549A6NIU2 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC13.54□□□□□ -0.24
LINC01549A6NIU2 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01549A6NIU2 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC13.54□□□□□ -0.24
LINC01549A6NIU2 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC13.54□□□□□ -0.24
LINC01549A6NIU2 AC019069.1-201ENST00000610008 1333 ntBASIC13.54□□□□□ -0.24
LINC01549A6NIU2 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01549A6NIU2 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC13.54□□□□□ -0.24
LINC01549A6NIU2 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01549A6NIU2 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
LINC01549A6NIU2 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01549A6NIU2 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01549A6NIU2 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01549A6NIU2 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC13.54□□□□□ -0.24
LINC01549A6NIU2 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01549A6NIU2 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01549A6NIU2 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC01549A6NIU2 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01549A6NIU2 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01549A6NIU2 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01549A6NIU2 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01549A6NIU2 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01549A6NIU2 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01549A6NIU2 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01549A6NIU2 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01549A6NIU2 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01549A6NIU2 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC01549A6NIU2 AC091305.1-201ENST00000479476 895 ntBASIC13.53□□□□□ -0.24
LINC01549A6NIU2 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC13.53□□□□□ -0.24
LINC01549A6NIU2 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC01549A6NIU2 BRWD1-AS2-201ENST00000603064 1028 ntBASIC13.53□□□□□ -0.24
LINC01549A6NIU2 AL035685.1-201ENST00000636663 812 ntBASIC13.53□□□□□ -0.24
LINC01549A6NIU2 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
LINC01549A6NIU2 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01549A6NIU2 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01549A6NIU2 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC01549A6NIU2 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01549A6NIU2 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01549A6NIU2 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
LINC01549A6NIU2 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01549A6NIU2 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC01549A6NIU2 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC01549A6NIU2 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01549A6NIU2 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC01549A6NIU2 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
LINC01549A6NIU2 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC01549A6NIU2 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
LINC01549A6NIU2 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC01549A6NIU2 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01549A6NIU2 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01549A6NIU2 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01549A6NIU2 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC01549A6NIU2 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01549A6NIU2 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01549A6NIU2 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01549A6NIU2 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
LINC01549A6NIU2 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01549A6NIU2 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
LINC01549A6NIU2 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01549A6NIU2 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01549A6NIU2 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LINC01549A6NIU2 FER1L4-210ENST00000615531 5998 ntBASIC13.52□□□□□ -0.24
LINC01549A6NIU2 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC01549A6NIU2 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LINC01549A6NIU2 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC13.52□□□□□ -0.24
LINC01549A6NIU2 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LINC01549A6NIU2 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC01549A6NIU2 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC13.52□□□□□ -0.24
LINC01549A6NIU2 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.24
LINC01549A6NIU2 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LINC01549A6NIU2 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC01549A6NIU2 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC01549A6NIU2 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LINC01549A6NIU2 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC01549A6NIU2 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
LINC01549A6NIU2 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
LINC01549A6NIU2 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LINC01549A6NIU2 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC01549A6NIU2 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
LINC01549A6NIU2 MCRIP2P1-201ENST00000394346 511 ntBASIC13.52□□□□□ -0.25
LINC01549A6NIU2 AL136116.3-201ENST00000402907 1138 ntBASIC13.52□□□□□ -0.25
LINC01549A6NIU2 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms