Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC13.46□□□□□ -0.26
LINC01546A6NGU7 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LINC01546A6NGU7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC13.46□□□□□ -0.26
LINC01546A6NGU7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC13.46□□□□□ -0.26
LINC01546A6NGU7 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
LINC01546A6NGU7 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC13.46□□□□□ -0.26
LINC01546A6NGU7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LINC01546A6NGU7 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
LINC01546A6NGU7 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LINC01546A6NGU7 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
LINC01546A6NGU7 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01546A6NGU7 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC13.45□□□□□ -0.26
LINC01546A6NGU7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01546A6NGU7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01546A6NGU7 NARF-204ENST00000390006 1766 ntTSL 2 BASIC13.45□□□□□ -0.26
LINC01546A6NGU7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01546A6NGU7 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01546A6NGU7 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01546A6NGU7 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01546A6NGU7 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC13.45□□□□□ -0.26
LINC01546A6NGU7 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01546A6NGU7 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
LINC01546A6NGU7 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01546A6NGU7 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01546A6NGU7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC13.45□□□□□ -0.26
LINC01546A6NGU7 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01546A6NGU7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01546A6NGU7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01546A6NGU7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01546A6NGU7 TERF1P5-201ENST00000477545 1207 ntBASIC13.45□□□□□ -0.26
LINC01546A6NGU7 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC13.45□□□□□ -0.26
LINC01546A6NGU7 AC007322.4-201ENST00000509611 723 ntBASIC13.45□□□□□ -0.26
LINC01546A6NGU7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC13.45□□□□□ -0.26
LINC01546A6NGU7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC13.45□□□□□ -0.26
LINC01546A6NGU7 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01546A6NGU7 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
LINC01546A6NGU7 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC13.45□□□□□ -0.26
LINC01546A6NGU7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
LINC01546A6NGU7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
LINC01546A6NGU7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
LINC01546A6NGU7 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
LINC01546A6NGU7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01546A6NGU7 KRT8P8-201ENST00000434750 1448 ntBASIC13.45□□□□□ -0.26
LINC01546A6NGU7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC13.45□□□□□ -0.26
LINC01546A6NGU7 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01546A6NGU7 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01546A6NGU7 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC13.45□□□□□ -0.26
LINC01546A6NGU7 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
LINC01546A6NGU7 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01546A6NGU7 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01546A6NGU7 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01546A6NGU7 LINC02228-203ENST00000641970 1355 ntBASIC13.45□□□□□ -0.26
LINC01546A6NGU7 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
LINC01546A6NGU7 AD000864.1-201ENST00000624076 2295 ntBASIC13.44□□□□□ -0.26
LINC01546A6NGU7 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
LINC01546A6NGU7 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
LINC01546A6NGU7 AC080080.1-201ENST00000625121 2420 ntBASIC13.44□□□□□ -0.26
LINC01546A6NGU7 FLJ13224-201ENST00000313737 1514 ntBASIC13.44□□□□□ -0.26
LINC01546A6NGU7 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01546A6NGU7 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
LINC01546A6NGU7 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01546A6NGU7 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC13.44□□□□□ -0.26
LINC01546A6NGU7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC13.44□□□□□ -0.26
LINC01546A6NGU7 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC13.44□□□□□ -0.26
LINC01546A6NGU7 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
LINC01546A6NGU7 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01546A6NGU7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01546A6NGU7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC13.44□□□□□ -0.26
LINC01546A6NGU7 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01546A6NGU7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
LINC01546A6NGU7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01546A6NGU7 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01546A6NGU7 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01546A6NGU7 NME4-202ENST00000382940 766 ntTSL 3 BASIC13.44□□□□□ -0.26
LINC01546A6NGU7 AC027612.3-201ENST00000413684 1047 ntBASIC13.44□□□□□ -0.26
LINC01546A6NGU7 NME4-211ENST00000620944 1193 ntTSL 2 BASIC13.44□□□□□ -0.26
LINC01546A6NGU7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
LINC01546A6NGU7 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01546A6NGU7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01546A6NGU7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01546A6NGU7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01546A6NGU7 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01546A6NGU7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
LINC01546A6NGU7 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01546A6NGU7 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
LINC01546A6NGU7 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01546A6NGU7 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01546A6NGU7 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC13.44□□□□□ -0.26
LINC01546A6NGU7 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
LINC01546A6NGU7 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
LINC01546A6NGU7 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC13.44□□□□□ -0.26
LINC01546A6NGU7 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01546A6NGU7 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01546A6NGU7 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01546A6NGU7 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC13.44□□□□□ -0.26
LINC01546A6NGU7 HEIH-201ENST00000623091 1652 ntBASIC13.44□□□□□ -0.26
LINC01546A6NGU7 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01546A6NGU7 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC01546A6NGU7 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC13.43□□□□□ -0.26
LINC01546A6NGU7 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms