Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
TRIM49BA6NDI0 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM49BA6NDI0 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21■□□□□ 0.95
TRIM49BA6NDI0 TSPY21P-201ENST00000433481 731 ntBASIC21■□□□□ 0.95
TRIM49BA6NDI0 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21■□□□□ 0.95
TRIM49BA6NDI0 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21■□□□□ 0.95
TRIM49BA6NDI0 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRIM49BA6NDI0 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRIM49BA6NDI0 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21■□□□□ 0.95
TRIM49BA6NDI0 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM49BA6NDI0 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
TRIM49BA6NDI0 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM49BA6NDI0 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
TRIM49BA6NDI0 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21■□□□□ 0.95
TRIM49BA6NDI0 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
TRIM49BA6NDI0 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM49BA6NDI0 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM49BA6NDI0 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21■□□□□ 0.95
TRIM49BA6NDI0 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM49BA6NDI0 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.99■□□□□ 0.95
TRIM49BA6NDI0 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM49BA6NDI0 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.99■□□□□ 0.95
TRIM49BA6NDI0 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM49BA6NDI0 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM49BA6NDI0 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM49BA6NDI0 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM49BA6NDI0 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM49BA6NDI0 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM49BA6NDI0 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM49BA6NDI0 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM49BA6NDI0 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.99■□□□□ 0.95
TRIM49BA6NDI0 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM49BA6NDI0 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.99■□□□□ 0.95
TRIM49BA6NDI0 AC128676.1-201ENST00000454392 318 ntBASIC20.99■□□□□ 0.95
TRIM49BA6NDI0 AC133681.1-201ENST00000465482 601 ntBASIC20.99■□□□□ 0.95
TRIM49BA6NDI0 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.99■□□□□ 0.95
TRIM49BA6NDI0 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.99■□□□□ 0.95
TRIM49BA6NDI0 CD99P1-205ENST00000527459 561 ntBASIC20.99■□□□□ 0.95
TRIM49BA6NDI0 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.99■□□□□ 0.95
TRIM49BA6NDI0 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.99■□□□□ 0.95
TRIM49BA6NDI0 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM49BA6NDI0 Z98044.1-201ENST00000632503 1764 ntBASIC20.99■□□□□ 0.95
TRIM49BA6NDI0 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM49BA6NDI0 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM49BA6NDI0 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM49BA6NDI0 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM49BA6NDI0 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.98■□□□□ 0.95
TRIM49BA6NDI0 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
TRIM49BA6NDI0 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM49BA6NDI0 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.98■□□□□ 0.95
TRIM49BA6NDI0 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM49BA6NDI0 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM49BA6NDI0 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM49BA6NDI0 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
TRIM49BA6NDI0 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM49BA6NDI0 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.98■□□□□ 0.95
TRIM49BA6NDI0 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.98■□□□□ 0.95
TRIM49BA6NDI0 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
TRIM49BA6NDI0 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.98■□□□□ 0.95
TRIM49BA6NDI0 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.98■□□□□ 0.95
TRIM49BA6NDI0 AC110285.5-201ENST00000611501 352 ntBASIC20.98■□□□□ 0.95
TRIM49BA6NDI0 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.98■□□□□ 0.95
TRIM49BA6NDI0 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM49BA6NDI0 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.98■□□□□ 0.95
TRIM49BA6NDI0 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
TRIM49BA6NDI0 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM49BA6NDI0 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM49BA6NDI0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM49BA6NDI0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM49BA6NDI0 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM49BA6NDI0 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM49BA6NDI0 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TRIM49BA6NDI0 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM49BA6NDI0 AC007613.1-201ENST00000572811 2597 ntBASIC20.97■□□□□ 0.95
TRIM49BA6NDI0 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.97■□□□□ 0.95
TRIM49BA6NDI0 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM49BA6NDI0 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM49BA6NDI0 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
TRIM49BA6NDI0 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM49BA6NDI0 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
TRIM49BA6NDI0 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
TRIM49BA6NDI0 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.97■□□□□ 0.95
TRIM49BA6NDI0 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.97■□□□□ 0.95
TRIM49BA6NDI0 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.97■□□□□ 0.95
TRIM49BA6NDI0 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
TRIM49BA6NDI0 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM49BA6NDI0 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM49BA6NDI0 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM49BA6NDI0 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM49BA6NDI0 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM49BA6NDI0 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.96■□□□□ 0.95
TRIM49BA6NDI0 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM49BA6NDI0 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM49BA6NDI0 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM49BA6NDI0 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM49BA6NDI0 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM49BA6NDI0 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM49BA6NDI0 AC005082.1-201ENST00000413042 2259 ntBASIC20.96■□□□□ 0.95
TRIM49BA6NDI0 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM49BA6NDI0 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms