Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 KRT18P31-201ENST00000506277 1292 ntBASIC25.82■■□□□ 1.72
SBNO1A3KN83 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC25.82■■□□□ 1.72
SBNO1A3KN83 PNN-202ENST00000553331 656 ntTSL 3 BASIC25.82■■□□□ 1.72
SBNO1A3KN83 BMF-207ENST00000559701 630 ntTSL 3 BASIC25.82■■□□□ 1.72
SBNO1A3KN83 AC091304.2-201ENST00000564639 760 ntBASIC25.82■■□□□ 1.72
SBNO1A3KN83 RNF126P1-202ENST00000569893 925 ntBASIC25.82■■□□□ 1.72
SBNO1A3KN83 MIR3917-201ENST00000580971 93 ntBASIC25.82■■□□□ 1.72
SBNO1A3KN83 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SBNO1A3KN83 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SBNO1A3KN83 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC25.82■■□□□ 1.72
SBNO1A3KN83 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
SBNO1A3KN83 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC25.82■■□□□ 1.72
SBNO1A3KN83 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC25.82■■□□□ 1.72
SBNO1A3KN83 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SBNO1A3KN83 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SBNO1A3KN83 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
SBNO1A3KN83 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
SBNO1A3KN83 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SBNO1A3KN83 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
SBNO1A3KN83 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SBNO1A3KN83 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SBNO1A3KN83 LINC00265-3P-201ENST00000447588 903 ntBASIC25.82■■□□□ 1.72
SBNO1A3KN83 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC25.82■■□□□ 1.72
SBNO1A3KN83 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC25.82■■□□□ 1.72
SBNO1A3KN83 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC25.82■■□□□ 1.72
SBNO1A3KN83 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SBNO1A3KN83 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SBNO1A3KN83 TCF3P1-201ENST00000423021 1937 ntBASIC25.81■■□□□ 1.72
SBNO1A3KN83 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SBNO1A3KN83 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
SBNO1A3KN83 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
SBNO1A3KN83 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SBNO1A3KN83 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SBNO1A3KN83 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SBNO1A3KN83 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SBNO1A3KN83 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC25.81■■□□□ 1.72
SBNO1A3KN83 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC25.81■■□□□ 1.72
SBNO1A3KN83 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
SBNO1A3KN83 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SBNO1A3KN83 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC25.81■■□□□ 1.72
SBNO1A3KN83 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
SBNO1A3KN83 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
SBNO1A3KN83 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SBNO1A3KN83 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SBNO1A3KN83 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SBNO1A3KN83 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SBNO1A3KN83 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SBNO1A3KN83 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SBNO1A3KN83 MCCD1P1-208ENST00000445732 328 ntBASIC25.8■■□□□ 1.72
SBNO1A3KN83 TOB2P1-201ENST00000469761 992 ntBASIC25.8■■□□□ 1.72
SBNO1A3KN83 AP000867.3-201ENST00000524675 377 ntBASIC25.8■■□□□ 1.72
SBNO1A3KN83 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC25.79■■□□□ 1.72
SBNO1A3KN83 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC25.79■■□□□ 1.72
SBNO1A3KN83 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SBNO1A3KN83 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SBNO1A3KN83 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SBNO1A3KN83 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC25.79■■□□□ 1.72
SBNO1A3KN83 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC25.79■■□□□ 1.72
SBNO1A3KN83 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC25.79■■□□□ 1.72
SBNO1A3KN83 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
SBNO1A3KN83 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SBNO1A3KN83 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC25.78■■□□□ 1.72
SBNO1A3KN83 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SBNO1A3KN83 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SBNO1A3KN83 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
SBNO1A3KN83 FOSL1P1-201ENST00000511041 816 ntBASIC25.78■■□□□ 1.72
SBNO1A3KN83 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SBNO1A3KN83 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SBNO1A3KN83 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC25.78■■□□□ 1.72
SBNO1A3KN83 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SBNO1A3KN83 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC25.78■■□□□ 1.72
SBNO1A3KN83 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SBNO1A3KN83 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SBNO1A3KN83 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SBNO1A3KN83 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SBNO1A3KN83 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SBNO1A3KN83 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
SBNO1A3KN83 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SBNO1A3KN83 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SBNO1A3KN83 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SBNO1A3KN83 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SBNO1A3KN83 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
SBNO1A3KN83 USP39-204ENST00000409766 2033 ntTSL 2 BASIC25.77■■□□□ 1.72
SBNO1A3KN83 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC25.77■■□□□ 1.72
SBNO1A3KN83 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SBNO1A3KN83 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
SBNO1A3KN83 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SBNO1A3KN83 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
SBNO1A3KN83 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
SBNO1A3KN83 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC25.77■■□□□ 1.72
SBNO1A3KN83 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC25.77■■□□□ 1.72
SBNO1A3KN83 AL662844.1-201ENST00000546340 181 ntBASIC25.77■■□□□ 1.72
SBNO1A3KN83 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC25.77■■□□□ 1.72
SBNO1A3KN83 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC25.77■■□□□ 1.72
SBNO1A3KN83 AL671883.3-201ENST00000603274 991 ntBASIC25.77■■□□□ 1.72
SBNO1A3KN83 AC112497.1-201ENST00000624824 639 ntBASIC25.77■■□□□ 1.72
SBNO1A3KN83 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.72
SBNO1A3KN83 ZNF815P-204ENST00000434898 1737 ntBASIC25.76■■□□□ 1.71
SBNO1A3KN83 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC25.76■■□□□ 1.71
SBNO1A3KN83 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms