Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TCRBV5S1A1TA0A578 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.89■□□□□ 0.77
TCRBV5S1A1TA0A578 AC068587.9-201ENST00000641814 219 ntBASIC19.89■□□□□ 0.77
TCRBV5S1A1TA0A578 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
TCRBV5S1A1TA0A578 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TCRBV5S1A1TA0A578 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
TCRBV5S1A1TA0A578 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.88■□□□□ 0.77
TCRBV5S1A1TA0A578 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBV5S1A1TA0A578 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBV5S1A1TA0A578 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
TCRBV5S1A1TA0A578 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBV5S1A1TA0A578 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.88■□□□□ 0.77
TCRBV5S1A1TA0A578 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
TCRBV5S1A1TA0A578 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBV5S1A1TA0A578 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.88■□□□□ 0.77
TCRBV5S1A1TA0A578 KRT8P32-201ENST00000512863 1461 ntBASIC19.88■□□□□ 0.77
TCRBV5S1A1TA0A578 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBV5S1A1TA0A578 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBV5S1A1TA0A578 AC096733.2-201ENST00000609937 1394 ntBASIC19.88■□□□□ 0.77
TCRBV5S1A1TA0A578 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBV5S1A1TA0A578 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.88■□□□□ 0.77
TCRBV5S1A1TA0A578 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBV5S1A1TA0A578 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.88■□□□□ 0.77
TCRBV5S1A1TA0A578 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.88■□□□□ 0.77
TCRBV5S1A1TA0A578 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
TCRBV5S1A1TA0A578 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.88■□□□□ 0.77
TCRBV5S1A1TA0A578 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.88■□□□□ 0.77
TCRBV5S1A1TA0A578 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.88■□□□□ 0.77
TCRBV5S1A1TA0A578 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.88■□□□□ 0.77
TCRBV5S1A1TA0A578 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
TCRBV5S1A1TA0A578 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBV5S1A1TA0A578 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
TCRBV5S1A1TA0A578 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBV5S1A1TA0A578 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.88■□□□□ 0.77
TCRBV5S1A1TA0A578 HEIH-201ENST00000623091 1652 ntBASIC19.87■□□□□ 0.77
TCRBV5S1A1TA0A578 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TCRBV5S1A1TA0A578 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBV5S1A1TA0A578 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBV5S1A1TA0A578 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBV5S1A1TA0A578 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBV5S1A1TA0A578 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBV5S1A1TA0A578 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.87■□□□□ 0.77
TCRBV5S1A1TA0A578 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TCRBV5S1A1TA0A578 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBV5S1A1TA0A578 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBV5S1A1TA0A578 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBV5S1A1TA0A578 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TCRBV5S1A1TA0A578 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TCRBV5S1A1TA0A578 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBV5S1A1TA0A578 REXO1L10P-201ENST00000615707 1290 ntBASIC19.87■□□□□ 0.77
TCRBV5S1A1TA0A578 REXO1L12P-201ENST00000622156 912 ntBASIC19.87■□□□□ 0.77
TCRBV5S1A1TA0A578 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
TCRBV5S1A1TA0A578 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.87■□□□□ 0.77
TCRBV5S1A1TA0A578 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBV5S1A1TA0A578 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.87■□□□□ 0.77
TCRBV5S1A1TA0A578 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TCRBV5S1A1TA0A578 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBV5S1A1TA0A578 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBV5S1A1TA0A578 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBV5S1A1TA0A578 MTMR9LP-203ENST00000426597 1545 ntBASIC19.86■□□□□ 0.77
TCRBV5S1A1TA0A578 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TCRBV5S1A1TA0A578 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.86■□□□□ 0.77
TCRBV5S1A1TA0A578 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TCRBV5S1A1TA0A578 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TCRBV5S1A1TA0A578 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
TCRBV5S1A1TA0A578 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.86■□□□□ 0.77
TCRBV5S1A1TA0A578 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TCRBV5S1A1TA0A578 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
TCRBV5S1A1TA0A578 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TCRBV5S1A1TA0A578 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
TCRBV5S1A1TA0A578 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.86■□□□□ 0.77
TCRBV5S1A1TA0A578 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TCRBV5S1A1TA0A578 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TCRBV5S1A1TA0A578 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.86■□□□□ 0.77
TCRBV5S1A1TA0A578 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.86■□□□□ 0.77
TCRBV5S1A1TA0A578 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.86■□□□□ 0.77
TCRBV5S1A1TA0A578 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.86■□□□□ 0.77
TCRBV5S1A1TA0A578 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.86■□□□□ 0.77
TCRBV5S1A1TA0A578 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.86■□□□□ 0.77
TCRBV5S1A1TA0A578 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.86■□□□□ 0.77
TCRBV5S1A1TA0A578 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
TCRBV5S1A1TA0A578 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.86■□□□□ 0.77
TCRBV5S1A1TA0A578 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.86■□□□□ 0.77
TCRBV5S1A1TA0A578 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TCRBV5S1A1TA0A578 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TCRBV5S1A1TA0A578 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TCRBV5S1A1TA0A578 ANO7L1-203ENST00000602586 1720 ntBASIC19.85■□□□□ 0.77
TCRBV5S1A1TA0A578 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TCRBV5S1A1TA0A578 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.85■□□□□ 0.77
TCRBV5S1A1TA0A578 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
TCRBV5S1A1TA0A578 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.85■□□□□ 0.77
TCRBV5S1A1TA0A578 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TCRBV5S1A1TA0A578 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TCRBV5S1A1TA0A578 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TCRBV5S1A1TA0A578 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
TCRBV5S1A1TA0A578 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.85■□□□□ 0.77
TCRBV5S1A1TA0A578 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
TCRBV5S1A1TA0A578 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TCRBV5S1A1TA0A578 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
TCRBV5S1A1TA0A578 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms