Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 POU5F1P3-201ENST00000428824 1078 ntBASIC13.45□□□□□ -0.26
TRBV6-4A0A1B0GX49 PTPA-216ENST00000432651 857 ntTSL 2 BASIC13.45□□□□□ -0.26
TRBV6-4A0A1B0GX49 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-4A0A1B0GX49 AC128676.1-201ENST00000454392 318 ntBASIC13.45□□□□□ -0.26
TRBV6-4A0A1B0GX49 AP002982.1-201ENST00000492365 877 ntBASIC13.45□□□□□ -0.26
TRBV6-4A0A1B0GX49 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-4A0A1B0GX49 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-4A0A1B0GX49 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TRBV6-4A0A1B0GX49 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-4A0A1B0GX49 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC13.45□□□□□ -0.26
TRBV6-4A0A1B0GX49 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC13.45□□□□□ -0.26
TRBV6-4A0A1B0GX49 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC13.45□□□□□ -0.26
TRBV6-4A0A1B0GX49 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC13.45□□□□□ -0.26
TRBV6-4A0A1B0GX49 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-4A0A1B0GX49 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC13.45□□□□□ -0.26
TRBV6-4A0A1B0GX49 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC13.45□□□□□ -0.26
TRBV6-4A0A1B0GX49 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-4A0A1B0GX49 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC13.45□□□□□ -0.26
TRBV6-4A0A1B0GX49 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-4A0A1B0GX49 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC13.45□□□□□ -0.26
TRBV6-4A0A1B0GX49 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-4A0A1B0GX49 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TRBV6-4A0A1B0GX49 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-4A0A1B0GX49 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 NIFKP9-201ENST00000419265 221 ntBASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 AC090340.1-201ENST00000620778 4980 ntBASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 AC093525.10-201ENST00000625130 1569 ntBASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 KRT8P41-201ENST00000533985 1514 ntBASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC13.44□□□□□ -0.26
TRBV6-4A0A1B0GX49 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV6-4A0A1B0GX49 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC13.43□□□□□ -0.26
TRBV6-4A0A1B0GX49 GOLGA6L5P-202ENST00000515341 1828 ntBASIC13.43□□□□□ -0.26
TRBV6-4A0A1B0GX49 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV6-4A0A1B0GX49 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
TRBV6-4A0A1B0GX49 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
TRBV6-4A0A1B0GX49 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV6-4A0A1B0GX49 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV6-4A0A1B0GX49 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV6-4A0A1B0GX49 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV6-4A0A1B0GX49 Z98044.1-201ENST00000632503 1764 ntBASIC13.43□□□□□ -0.26
TRBV6-4A0A1B0GX49 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC13.43□□□□□ -0.26
TRBV6-4A0A1B0GX49 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV6-4A0A1B0GX49 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV6-4A0A1B0GX49 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV6-4A0A1B0GX49 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV6-4A0A1B0GX49 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV6-4A0A1B0GX49 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
TRBV6-4A0A1B0GX49 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV6-4A0A1B0GX49 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
TRBV6-4A0A1B0GX49 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV6-4A0A1B0GX49 TSPY23P-201ENST00000440136 739 ntBASIC13.43□□□□□ -0.26
TRBV6-4A0A1B0GX49 KSR1P1-201ENST00000446298 240 ntBASIC13.43□□□□□ -0.26
TRBV6-4A0A1B0GX49 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC13.43□□□□□ -0.26
TRBV6-4A0A1B0GX49 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC13.43□□□□□ -0.26
TRBV6-4A0A1B0GX49 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV6-4A0A1B0GX49 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC13.43□□□□□ -0.26
TRBV6-4A0A1B0GX49 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms