Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC22.17■■□□□ 1.14
CCDC196A0A1B0GTZ2 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC196A0A1B0GTZ2 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC196A0A1B0GTZ2 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
CCDC196A0A1B0GTZ2 TSPY7P-201ENST00000431358 1114 ntBASIC22.17■■□□□ 1.14
CCDC196A0A1B0GTZ2 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC196A0A1B0GTZ2 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC22.17■■□□□ 1.14
CCDC196A0A1B0GTZ2 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC22.17■■□□□ 1.14
CCDC196A0A1B0GTZ2 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC196A0A1B0GTZ2 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC22.17■■□□□ 1.14
CCDC196A0A1B0GTZ2 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC22.17■■□□□ 1.14
CCDC196A0A1B0GTZ2 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC22.17■■□□□ 1.14
CCDC196A0A1B0GTZ2 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC196A0A1B0GTZ2 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC22.17■■□□□ 1.14
CCDC196A0A1B0GTZ2 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC196A0A1B0GTZ2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC196A0A1B0GTZ2 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC196A0A1B0GTZ2 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC196A0A1B0GTZ2 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC196A0A1B0GTZ2 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC196A0A1B0GTZ2 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CCDC196A0A1B0GTZ2 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CCDC196A0A1B0GTZ2 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CCDC196A0A1B0GTZ2 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CCDC196A0A1B0GTZ2 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC22.16■■□□□ 1.14
CCDC196A0A1B0GTZ2 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CCDC196A0A1B0GTZ2 AC096733.2-201ENST00000609937 1394 ntBASIC22.16■■□□□ 1.14
CCDC196A0A1B0GTZ2 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
CCDC196A0A1B0GTZ2 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CCDC196A0A1B0GTZ2 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC22.16■■□□□ 1.14
CCDC196A0A1B0GTZ2 SNORA78-201ENST00000459373 127 ntBASIC22.16■■□□□ 1.14
CCDC196A0A1B0GTZ2 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC22.16■■□□□ 1.14
CCDC196A0A1B0GTZ2 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC22.16■■□□□ 1.14
CCDC196A0A1B0GTZ2 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC22.16■■□□□ 1.14
CCDC196A0A1B0GTZ2 GRAMD4P8-201ENST00000605465 1115 ntBASIC22.16■■□□□ 1.14
CCDC196A0A1B0GTZ2 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CCDC196A0A1B0GTZ2 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC22.16■■□□□ 1.14
CCDC196A0A1B0GTZ2 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC22.16■■□□□ 1.14
CCDC196A0A1B0GTZ2 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC22.15■■□□□ 1.14
CCDC196A0A1B0GTZ2 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CCDC196A0A1B0GTZ2 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC22.15■■□□□ 1.14
CCDC196A0A1B0GTZ2 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CCDC196A0A1B0GTZ2 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC22.15■■□□□ 1.14
CCDC196A0A1B0GTZ2 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC22.15■■□□□ 1.14
CCDC196A0A1B0GTZ2 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
CCDC196A0A1B0GTZ2 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
CCDC196A0A1B0GTZ2 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC22.15■■□□□ 1.14
CCDC196A0A1B0GTZ2 MIR4497-201ENST00000583208 89 ntBASIC22.15■■□□□ 1.14
CCDC196A0A1B0GTZ2 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC22.15■■□□□ 1.14
CCDC196A0A1B0GTZ2 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
CCDC196A0A1B0GTZ2 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
CCDC196A0A1B0GTZ2 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC22.15■■□□□ 1.14
CCDC196A0A1B0GTZ2 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC22.15■■□□□ 1.14
CCDC196A0A1B0GTZ2 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CCDC196A0A1B0GTZ2 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CCDC196A0A1B0GTZ2 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
CCDC196A0A1B0GTZ2 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
CCDC196A0A1B0GTZ2 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
CCDC196A0A1B0GTZ2 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CCDC196A0A1B0GTZ2 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC22.14■■□□□ 1.14
CCDC196A0A1B0GTZ2 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
CCDC196A0A1B0GTZ2 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
CCDC196A0A1B0GTZ2 AL049812.1-201ENST00000432563 2267 ntBASIC22.14■■□□□ 1.14
CCDC196A0A1B0GTZ2 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
CCDC196A0A1B0GTZ2 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CCDC196A0A1B0GTZ2 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CCDC196A0A1B0GTZ2 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC22.14■■□□□ 1.13
CCDC196A0A1B0GTZ2 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CCDC196A0A1B0GTZ2 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
CCDC196A0A1B0GTZ2 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
CCDC196A0A1B0GTZ2 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC22.14■■□□□ 1.13
CCDC196A0A1B0GTZ2 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.13
CCDC196A0A1B0GTZ2 AC066615.1-201ENST00000640911 628 ntBASIC22.14■■□□□ 1.13
CCDC196A0A1B0GTZ2 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC22.14■■□□□ 1.13
CCDC196A0A1B0GTZ2 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC22.14■■□□□ 1.13
CCDC196A0A1B0GTZ2 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
CCDC196A0A1B0GTZ2 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
CCDC196A0A1B0GTZ2 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CCDC196A0A1B0GTZ2 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
CCDC196A0A1B0GTZ2 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CCDC196A0A1B0GTZ2 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCDC196A0A1B0GTZ2 AC120498.9-201ENST00000339021 3867 ntBASIC22.13■■□□□ 1.13
CCDC196A0A1B0GTZ2 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCDC196A0A1B0GTZ2 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCDC196A0A1B0GTZ2 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC22.13■■□□□ 1.13
CCDC196A0A1B0GTZ2 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC22.13■■□□□ 1.13
CCDC196A0A1B0GTZ2 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC22.13■■□□□ 1.13
CCDC196A0A1B0GTZ2 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC22.13■■□□□ 1.13
CCDC196A0A1B0GTZ2 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC22.13■■□□□ 1.13
CCDC196A0A1B0GTZ2 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
CCDC196A0A1B0GTZ2 AC097488.1-201ENST00000507834 756 ntBASIC22.13■■□□□ 1.13
CCDC196A0A1B0GTZ2 AC093827.2-201ENST00000512654 315 ntBASIC22.13■■□□□ 1.13
CCDC196A0A1B0GTZ2 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC22.13■■□□□ 1.13
CCDC196A0A1B0GTZ2 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CCDC196A0A1B0GTZ2 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCDC196A0A1B0GTZ2 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCDC196A0A1B0GTZ2 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCDC196A0A1B0GTZ2 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC22.13■■□□□ 1.13
CCDC196A0A1B0GTZ2 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCDC196A0A1B0GTZ2 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms