Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
ZFYVE28Q9HCC9 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
ZFYVE28Q9HCC9 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
ZFYVE28Q9HCC9 ZNF72P-201ENST00000425869 1908 ntBASIC4.95□□□□□ -1.62
ZFYVE28Q9HCC9 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
ZFYVE28Q9HCC9 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.95□□□□□ -1.62
ZFYVE28Q9HCC9 RNU4-42P-201ENST00000364738 142 ntBASIC4.95□□□□□ -1.62
ZFYVE28Q9HCC9 Y_RNA.396-201ENST00000383949 103 ntBASIC4.95□□□□□ -1.62
ZFYVE28Q9HCC9 Y_RNA.526-201ENST00000384572 110 ntBASIC4.95□□□□□ -1.62
ZFYVE28Q9HCC9 MIR625-201ENST00000385047 85 ntBASIC4.95□□□□□ -1.62
ZFYVE28Q9HCC9 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.95□□□□□ -1.62
ZFYVE28Q9HCC9 AC079780.1-201ENST00000428259 207 ntBASIC4.95□□□□□ -1.62
ZFYVE28Q9HCC9 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.95□□□□□ -1.62
ZFYVE28Q9HCC9 RPS24P13-201ENST00000442520 397 ntBASIC4.95□□□□□ -1.62
ZFYVE28Q9HCC9 RPS3AP12-201ENST00000443616 753 ntBASIC4.95□□□□□ -1.62
ZFYVE28Q9HCC9 BTF3P6-201ENST00000448054 499 ntBASIC4.95□□□□□ -1.62
ZFYVE28Q9HCC9 CHEK2P4-201ENST00000450340 246 ntBASIC4.95□□□□□ -1.62
ZFYVE28Q9HCC9 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.95□□□□□ -1.62
ZFYVE28Q9HCC9 MTCO3P8-201ENST00000453691 755 ntBASIC4.95□□□□□ -1.62
ZFYVE28Q9HCC9 RPL35AP15-201ENST00000468042 339 ntBASIC4.95□□□□□ -1.62
ZFYVE28Q9HCC9 HMGB3P16-201ENST00000508037 287 ntBASIC4.95□□□□□ -1.62
ZFYVE28Q9HCC9 AP000889.1-201ENST00000530968 660 ntBASIC4.95□□□□□ -1.62
ZFYVE28Q9HCC9 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.95□□□□□ -1.62
ZFYVE28Q9HCC9 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.95□□□□□ -1.62
ZFYVE28Q9HCC9 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.95□□□□□ -1.62
ZFYVE28Q9HCC9 AC125232.2-201ENST00000592457 143 ntBASIC4.95□□□□□ -1.62
ZFYVE28Q9HCC9 SNORA51-201ENST00000606420 132 ntBASIC4.95□□□□□ -1.62
ZFYVE28Q9HCC9 MIR3976-201ENST00000606807 139 ntBASIC4.95□□□□□ -1.62
ZFYVE28Q9HCC9 HMGB1P24-202ENST00000615653 685 ntBASIC4.95□□□□□ -1.62
ZFYVE28Q9HCC9 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.95□□□□□ -1.62
ZFYVE28Q9HCC9 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.95□□□□□ -1.62
ZFYVE28Q9HCC9 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
ZFYVE28Q9HCC9 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
ZFYVE28Q9HCC9 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
ZFYVE28Q9HCC9 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
ZFYVE28Q9HCC9 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
ZFYVE28Q9HCC9 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
ZFYVE28Q9HCC9 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
ZFYVE28Q9HCC9 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
ZFYVE28Q9HCC9 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ZFYVE28Q9HCC9 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
ZFYVE28Q9HCC9 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ZFYVE28Q9HCC9 DEFB108F-201ENST00000344638 222 ntBASIC4.94□□□□□ -1.62
ZFYVE28Q9HCC9 RNA5SP235-201ENST00000365411 114 ntBASIC4.94□□□□□ -1.62
ZFYVE28Q9HCC9 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
ZFYVE28Q9HCC9 RPL21P1-201ENST00000399532 476 ntBASIC4.94□□□□□ -1.62
ZFYVE28Q9HCC9 AL096701.2-201ENST00000416920 238 ntBASIC4.94□□□□□ -1.62
ZFYVE28Q9HCC9 CKS1BP6-201ENST00000424932 240 ntBASIC4.94□□□□□ -1.62
ZFYVE28Q9HCC9 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.94□□□□□ -1.62
ZFYVE28Q9HCC9 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.94□□□□□ -1.62
ZFYVE28Q9HCC9 AL591473.1-201ENST00000464297 313 ntBASIC4.94□□□□□ -1.62
ZFYVE28Q9HCC9 AC107222.1-201ENST00000510899 637 ntBASIC4.94□□□□□ -1.62
ZFYVE28Q9HCC9 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.94□□□□□ -1.62
ZFYVE28Q9HCC9 Y_RNA.687-201ENST00000516558 91 ntBASIC4.94□□□□□ -1.62
ZFYVE28Q9HCC9 AC144568.1-201ENST00000520139 137 ntBASIC4.94□□□□□ -1.62
ZFYVE28Q9HCC9 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
ZFYVE28Q9HCC9 CPDP1-201ENST00000579660 283 ntBASIC4.94□□□□□ -1.62
ZFYVE28Q9HCC9 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.94□□□□□ -1.62
ZFYVE28Q9HCC9 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.94□□□□□ -1.62
ZFYVE28Q9HCC9 MTND4LP5-201ENST00000605152 292 ntBASIC4.94□□□□□ -1.62
ZFYVE28Q9HCC9 AC015914.2-201ENST00000618167 288 ntBASIC4.94□□□□□ -1.62
ZFYVE28Q9HCC9 MIR6715B-201ENST00000637172 77 ntBASIC4.94□□□□□ -1.62
ZFYVE28Q9HCC9 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ZFYVE28Q9HCC9 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
ZFYVE28Q9HCC9 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.94□□□□□ -1.62
ZFYVE28Q9HCC9 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
ZFYVE28Q9HCC9 MAPK10-286ENST00000641208 8747 ntBASIC4.94□□□□□ -1.62
ZFYVE28Q9HCC9 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
ZFYVE28Q9HCC9 AC004925.1-201ENST00000624256 2706 ntBASIC4.94□□□□□ -1.62
ZFYVE28Q9HCC9 AL592182.3-201ENST00000642132 3304 ntBASIC4.94□□□□□ -1.62
ZFYVE28Q9HCC9 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ZFYVE28Q9HCC9 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
ZFYVE28Q9HCC9 NEAT1-202ENST00000501122 22743 ntBASIC4.93□□□□□ -1.62
ZFYVE28Q9HCC9 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
ZFYVE28Q9HCC9 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
ZFYVE28Q9HCC9 Y_RNA.447-201ENST00000384184 113 ntBASIC4.93□□□□□ -1.62
ZFYVE28Q9HCC9 Y_RNA.551-201ENST00000384661 102 ntBASIC4.93□□□□□ -1.62
ZFYVE28Q9HCC9 MIR514A1-201ENST00000385133 98 ntBASIC4.93□□□□□ -1.62
ZFYVE28Q9HCC9 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
ZFYVE28Q9HCC9 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
ZFYVE28Q9HCC9 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
ZFYVE28Q9HCC9 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.93□□□□□ -1.62
ZFYVE28Q9HCC9 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.93□□□□□ -1.62
ZFYVE28Q9HCC9 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.93□□□□□ -1.62
ZFYVE28Q9HCC9 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.93□□□□□ -1.62
ZFYVE28Q9HCC9 RPL23AP81-201ENST00000455252 467 ntBASIC4.93□□□□□ -1.62
ZFYVE28Q9HCC9 AC133134.1-201ENST00000466800 359 ntBASIC4.93□□□□□ -1.62
ZFYVE28Q9HCC9 FO393415.2-201ENST00000480085 343 ntBASIC4.93□□□□□ -1.62
ZFYVE28Q9HCC9 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.93□□□□□ -1.62
ZFYVE28Q9HCC9 RNU2-53P-201ENST00000516257 147 ntBASIC4.93□□□□□ -1.62
ZFYVE28Q9HCC9 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.93□□□□□ -1.62
ZFYVE28Q9HCC9 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ZFYVE28Q9HCC9 AC015912.2-201ENST00000571053 181 ntBASIC4.93□□□□□ -1.62
ZFYVE28Q9HCC9 AC091178.1-203ENST00000584586 279 ntBASIC4.93□□□□□ -1.62
ZFYVE28Q9HCC9 AL161798.1-201ENST00000604630 131 ntBASIC4.93□□□□□ -1.62
ZFYVE28Q9HCC9 AL121917.1-203ENST00000605534 577 ntBASIC4.93□□□□□ -1.62
ZFYVE28Q9HCC9 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.93□□□□□ -1.62
ZFYVE28Q9HCC9 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
ZFYVE28Q9HCC9 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
ZFYVE28Q9HCC9 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms