Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 SDR42E1P2-201ENST00000614861 481 ntBASIC3.73□□□□□ -1.81
RHOP08100 uc_338.15-201ENST00000615470 191 ntBASIC3.73□□□□□ -1.81
RHOP08100 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.73□□□□□ -1.81
RHOP08100 U4.6-201ENST00000621618 127 ntBASIC3.73□□□□□ -1.81
RHOP08100 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.73□□□□□ -1.81
RHOP08100 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.73□□□□□ -1.81
RHOP08100 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RHOP08100 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.73□□□□□ -1.81
RHOP08100 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
RHOP08100 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
RHOP08100 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RHOP08100 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.72□□□□□ -1.81
RHOP08100 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RHOP08100 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RHOP08100 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
RHOP08100 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RHOP08100 Y_RNA.326-201ENST00000365176 113 ntBASIC3.72□□□□□ -1.81
RHOP08100 Y_RNA.399-201ENST00000383955 105 ntBASIC3.72□□□□□ -1.81
RHOP08100 MIR607-201ENST00000385241 96 ntBASIC3.72□□□□□ -1.81
RHOP08100 SNORD17-201ENST00000390930 237 ntBASIC3.72□□□□□ -1.81
RHOP08100 RNU6-817P-201ENST00000391083 104 ntBASIC3.72□□□□□ -1.81
RHOP08100 EIF4E2P1-201ENST00000393781 255 ntBASIC3.72□□□□□ -1.81
RHOP08100 AF228730.4-201ENST00000421457 183 ntBASIC3.72□□□□□ -1.81
RHOP08100 MTCO2P12-201ENST00000427426 682 ntBASIC3.72□□□□□ -1.81
RHOP08100 AC005300.1-201ENST00000428401 373 ntBASIC3.72□□□□□ -1.81
RHOP08100 NDUFB1P1-201ENST00000435191 180 ntBASIC3.72□□□□□ -1.81
RHOP08100 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.72□□□□□ -1.81
RHOP08100 HMGB3P11-201ENST00000440127 604 ntBASIC3.72□□□□□ -1.81
RHOP08100 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.72□□□□□ -1.81
RHOP08100 TRBV1-201ENST00000476502 284 ntBASIC3.72□□□□□ -1.81
RHOP08100 RPL21P93-201ENST00000480465 489 ntBASIC3.72□□□□□ -1.81
RHOP08100 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RHOP08100 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.72□□□□□ -1.81
RHOP08100 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.72□□□□□ -1.81
RHOP08100 RNU6-189P-201ENST00000516120 101 ntBASIC3.72□□□□□ -1.81
RHOP08100 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.72□□□□□ -1.81
RHOP08100 OR5D17P-201ENST00000531492 978 ntBASIC3.72□□□□□ -1.81
RHOP08100 MTCO3P23-201ENST00000561363 289 ntBASIC3.72□□□□□ -1.81
RHOP08100 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.72□□□□□ -1.81
RHOP08100 MIR3942-201ENST00000585264 109 ntBASIC3.72□□□□□ -1.81
RHOP08100 XIAPP1-201ENST00000603162 600 ntBASIC3.72□□□□□ -1.81
RHOP08100 AL138889.2-201ENST00000603883 242 ntBASIC3.72□□□□□ -1.81
RHOP08100 AC005000.2-201ENST00000605468 310 ntBASIC3.72□□□□□ -1.81
RHOP08100 AC007619.2-201ENST00000605743 379 ntBASIC3.72□□□□□ -1.81
RHOP08100 Z82243.1-201ENST00000609432 473 ntBASIC3.72□□□□□ -1.81
RHOP08100 AC009570.1-201ENST00000609599 745 ntBASIC3.72□□□□□ -1.81
RHOP08100 Y_RNA.812-201ENST00000610788 101 ntBASIC3.72□□□□□ -1.81
RHOP08100 Y_RNA.784-201ENST00000613803 101 ntBASIC3.72□□□□□ -1.81
RHOP08100 uc_338.32-201ENST00000615087 172 ntBASIC3.72□□□□□ -1.81
RHOP08100 Y_RNA.787-201ENST00000616522 101 ntBASIC3.72□□□□□ -1.81
RHOP08100 Y_RNA.780-201ENST00000617336 101 ntBASIC3.72□□□□□ -1.81
RHOP08100 AC126177.8-201ENST00000618339 1015 ntBASIC3.72□□□□□ -1.81
RHOP08100 Y_RNA.801-201ENST00000619005 101 ntBASIC3.72□□□□□ -1.81
RHOP08100 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.72□□□□□ -1.81
RHOP08100 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RHOP08100 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RHOP08100 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RHOP08100 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
RHOP08100 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.71□□□□□ -1.81
RHOP08100 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.71□□□□□ -1.82
RHOP08100 AL133383.2-201ENST00000622958 2336 ntBASIC3.71□□□□□ -1.82
RHOP08100 RNU6-190P-201ENST00000384154 102 ntBASIC3.71□□□□□ -1.82
RHOP08100 RNU6-1181P-201ENST00000384191 106 ntBASIC3.71□□□□□ -1.82
RHOP08100 MIR548K-201ENST00000408406 116 ntBASIC3.71□□□□□ -1.82
RHOP08100 MIR1183-201ENST00000408856 89 ntBASIC3.71□□□□□ -1.82
RHOP08100 VN1R36P-201ENST00000414936 291 ntBASIC3.71□□□□□ -1.82
RHOP08100 MTATP6P4-201ENST00000427725 675 ntBASIC3.71□□□□□ -1.82
RHOP08100 AC017083.1-201ENST00000428093 483 ntBASIC3.71□□□□□ -1.82
RHOP08100 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.71□□□□□ -1.82
RHOP08100 AL591704.1-201ENST00000432574 275 ntBASIC3.71□□□□□ -1.82
RHOP08100 NEFMP1-201ENST00000443423 1006 ntBASIC3.71□□□□□ -1.82
RHOP08100 AC104058.1-201ENST00000448028 297 ntBASIC3.71□□□□□ -1.82
RHOP08100 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.71□□□□□ -1.82
RHOP08100 U3.44-201ENST00000458938 192 ntBASIC3.71□□□□□ -1.82
RHOP08100 SCARNA18-201ENST00000459004 134 ntBASIC3.71□□□□□ -1.82
RHOP08100 Y_RNA.635-201ENST00000459041 101 ntBASIC3.71□□□□□ -1.82
RHOP08100 MTND4P17-201ENST00000470444 350 ntBASIC3.71□□□□□ -1.82
RHOP08100 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.71□□□□□ -1.82
RHOP08100 RNU6-123P-201ENST00000516163 102 ntBASIC3.71□□□□□ -1.82
RHOP08100 RNU6-390P-201ENST00000516259 103 ntBASIC3.71□□□□□ -1.82
RHOP08100 MIR2114-201ENST00000516645 80 ntBASIC3.71□□□□□ -1.82
RHOP08100 ERHP1-201ENST00000523006 310 ntBASIC3.71□□□□□ -1.82
RHOP08100 AP004371.1-201ENST00000525240 214 ntBASIC3.71□□□□□ -1.82
RHOP08100 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
RHOP08100 AC092747.3-201ENST00000603769 301 ntBASIC3.71□□□□□ -1.82
RHOP08100 AC104763.2-201ENST00000604179 382 ntBASIC3.71□□□□□ -1.82
RHOP08100 HMGB1P50-201ENST00000605814 607 ntBASIC3.71□□□□□ -1.82
RHOP08100 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.71□□□□□ -1.82
RHOP08100 PART1_1.1-201ENST00000611761 217 ntBASIC3.71□□□□□ -1.82
RHOP08100 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RHOP08100 AC009812.4-201ENST00000569134 1805 ntBASIC3.71□□□□□ -1.82
RHOP08100 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
RHOP08100 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
RHOP08100 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.71□□□□□ -1.82
RHOP08100 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RHOP08100 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.71□□□□□ -1.82
RHOP08100 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
RHOP08100 SDAD1P2-201ENST00000441308 2028 ntBASIC3.7□□□□□ -1.82
RHOP08100 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.7□□□□□ -1.82
RHOP08100 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms