Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 HMGB1P37-201ENST00000439613 609 ntBASIC5.55□□□□□ -1.52
LHX6Q9UPM6 SNRPGP8-201ENST00000454064 226 ntBASIC5.55□□□□□ -1.52
LHX6Q9UPM6 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.55□□□□□ -1.52
LHX6Q9UPM6 RN7SKP43-201ENST00000516173 320 ntBASIC5.55□□□□□ -1.52
LHX6Q9UPM6 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.55□□□□□ -1.52
LHX6Q9UPM6 AC027229.1-201ENST00000583887 253 ntBASIC5.55□□□□□ -1.52
LHX6Q9UPM6 MIR7641-1-201ENST00000627518 61 ntBASIC5.55□□□□□ -1.52
LHX6Q9UPM6 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
LHX6Q9UPM6 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LHX6Q9UPM6 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LHX6Q9UPM6 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LHX6Q9UPM6 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LHX6Q9UPM6 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
LHX6Q9UPM6 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.54□□□□□ -1.52
LHX6Q9UPM6 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.54□□□□□ -1.52
LHX6Q9UPM6 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC5.54□□□□□ -1.52
LHX6Q9UPM6 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
LHX6Q9UPM6 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LHX6Q9UPM6 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
LHX6Q9UPM6 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
LHX6Q9UPM6 TLK1P1-201ENST00000456760 2440 ntBASIC5.54□□□□□ -1.52
LHX6Q9UPM6 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.54□□□□□ -1.52
LHX6Q9UPM6 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LHX6Q9UPM6 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.54□□□□□ -1.52
LHX6Q9UPM6 RNU6-173P-201ENST00000364215 104 ntBASIC5.54□□□□□ -1.52
LHX6Q9UPM6 RNU6-978P-201ENST00000364371 103 ntBASIC5.54□□□□□ -1.52
LHX6Q9UPM6 SNORA18.3-201ENST00000384122 132 ntBASIC5.54□□□□□ -1.52
LHX6Q9UPM6 RNU6-1113P-201ENST00000384348 107 ntBASIC5.54□□□□□ -1.52
LHX6Q9UPM6 SNORA70.9-201ENST00000384370 135 ntBASIC5.54□□□□□ -1.52
LHX6Q9UPM6 MIR544A-201ENST00000384855 91 ntBASIC5.54□□□□□ -1.52
LHX6Q9UPM6 AL078599.1-201ENST00000402075 293 ntBASIC5.54□□□□□ -1.52
LHX6Q9UPM6 MIR320B2-201ENST00000408479 138 ntBASIC5.54□□□□□ -1.52
LHX6Q9UPM6 RNU6-383P-201ENST00000410864 94 ntBASIC5.54□□□□□ -1.52
LHX6Q9UPM6 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC5.54□□□□□ -1.52
LHX6Q9UPM6 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC5.54□□□□□ -1.52
LHX6Q9UPM6 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.54□□□□□ -1.52
LHX6Q9UPM6 AC134698.5-201ENST00000519444 336 ntBASIC5.54□□□□□ -1.52
LHX6Q9UPM6 AC022790.1-201ENST00000522872 204 ntBASIC5.54□□□□□ -1.52
LHX6Q9UPM6 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.54□□□□□ -1.52
LHX6Q9UPM6 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.54□□□□□ -1.52
LHX6Q9UPM6 AL359198.2-201ENST00000611836 194 ntBASIC5.54□□□□□ -1.52
LHX6Q9UPM6 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
LHX6Q9UPM6 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.54□□□□□ -1.52
LHX6Q9UPM6 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LHX6Q9UPM6 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LHX6Q9UPM6 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LHX6Q9UPM6 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LHX6Q9UPM6 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.54□□□□□ -1.52
LHX6Q9UPM6 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LHX6Q9UPM6 AC020656.2-201ENST00000613291 5309 ntBASIC5.54□□□□□ -1.52
LHX6Q9UPM6 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
LHX6Q9UPM6 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
LHX6Q9UPM6 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LHX6Q9UPM6 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LHX6Q9UPM6 AL133383.2-201ENST00000622958 2336 ntBASIC5.53□□□□□ -1.52
LHX6Q9UPM6 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.53□□□□□ -1.52
LHX6Q9UPM6 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LHX6Q9UPM6 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LHX6Q9UPM6 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
LHX6Q9UPM6 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.53□□□□□ -1.52
LHX6Q9UPM6 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
LHX6Q9UPM6 AC140134.1-201ENST00000511830 3544 ntBASIC5.53□□□□□ -1.52
LHX6Q9UPM6 Y_RNA.243-201ENST00000364481 109 ntBASIC5.53□□□□□ -1.52
LHX6Q9UPM6 SNORD12C-201ENST00000386307 89 ntBASIC5.53□□□□□ -1.52
LHX6Q9UPM6 RNA5SP487-201ENST00000410186 122 ntBASIC5.53□□□□□ -1.52
LHX6Q9UPM6 RNA5SP251-201ENST00000410614 137 ntBASIC5.53□□□□□ -1.52
LHX6Q9UPM6 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.53□□□□□ -1.52
LHX6Q9UPM6 RPL39P40-201ENST00000445481 146 ntBASIC5.53□□□□□ -1.52
LHX6Q9UPM6 AL451050.1-201ENST00000450126 415 ntBASIC5.53□□□□□ -1.52
LHX6Q9UPM6 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC5.53□□□□□ -1.52
LHX6Q9UPM6 AL389915.2-201ENST00000454576 441 ntBASIC5.53□□□□□ -1.52
LHX6Q9UPM6 RPL23AP14-201ENST00000468281 468 ntBASIC5.53□□□□□ -1.52
LHX6Q9UPM6 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.53□□□□□ -1.52
LHX6Q9UPM6 RNU6-107P-201ENST00000516643 102 ntBASIC5.53□□□□□ -1.52
LHX6Q9UPM6 LINC00933-203ENST00000559812 219 ntBASIC5.53□□□□□ -1.52
LHX6Q9UPM6 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC5.53□□□□□ -1.52
LHX6Q9UPM6 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LHX6Q9UPM6 PARP4P2-201ENST00000446672 3326 ntBASIC5.53□□□□□ -1.52
LHX6Q9UPM6 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
LHX6Q9UPM6 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
LHX6Q9UPM6 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LHX6Q9UPM6 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.53□□□□□ -1.52
LHX6Q9UPM6 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.53□□□□□ -1.52
LHX6Q9UPM6 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.53□□□□□ -1.52
LHX6Q9UPM6 OFD1P6Y-202ENST00000451061 2724 ntBASIC5.53□□□□□ -1.52
LHX6Q9UPM6 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LHX6Q9UPM6 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.52□□□□□ -1.53
LHX6Q9UPM6 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.52□□□□□ -1.53
LHX6Q9UPM6 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
LHX6Q9UPM6 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
LHX6Q9UPM6 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
LHX6Q9UPM6 AL137141.1-201ENST00000624622 4836 ntBASIC5.52□□□□□ -1.53
LHX6Q9UPM6 RNU6-440P-201ENST00000390882 105 ntBASIC5.52□□□□□ -1.53
LHX6Q9UPM6 NDUFS5P4-201ENST00000412983 318 ntBASIC5.52□□□□□ -1.53
LHX6Q9UPM6 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.52□□□□□ -1.53
LHX6Q9UPM6 AC244670.1-201ENST00000436879 112 ntBASIC5.52□□□□□ -1.53
LHX6Q9UPM6 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC5.52□□□□□ -1.53
LHX6Q9UPM6 RPS17P15-201ENST00000475609 349 ntBASIC5.52□□□□□ -1.53
LHX6Q9UPM6 AC025647.1-201ENST00000517879 253 ntBASIC5.52□□□□□ -1.53
LHX6Q9UPM6 AC073916.1-201ENST00000545095 130 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms