Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 MIR4679-1-201ENST00000637619 75 ntBASIC5.65□□□□□ -1.5
ACTN4O43707 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.65□□□□□ -1.51
ACTN4O43707 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
ACTN4O43707 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
ACTN4O43707 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
ACTN4O43707 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
ACTN4O43707 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.65□□□□□ -1.51
ACTN4O43707 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.65□□□□□ -1.51
ACTN4O43707 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.65□□□□□ -1.51
ACTN4O43707 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
ACTN4O43707 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
ACTN4O43707 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.64□□□□□ -1.51
ACTN4O43707 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.64□□□□□ -1.51
ACTN4O43707 ZNF204P-201ENST00000416749 2397 ntBASIC5.64□□□□□ -1.51
ACTN4O43707 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.64□□□□□ -1.51
ACTN4O43707 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ACTN4O43707 RNU6-834P-201ENST00000362367 110 ntBASIC5.64□□□□□ -1.51
ACTN4O43707 RNU5B-2P-201ENST00000363036 113 ntBASIC5.64□□□□□ -1.51
ACTN4O43707 RNU5E-7P-201ENST00000365290 117 ntBASIC5.64□□□□□ -1.51
ACTN4O43707 RNU6-239P-201ENST00000390990 99 ntBASIC5.64□□□□□ -1.51
ACTN4O43707 RPL30P13-201ENST00000418873 348 ntBASIC5.64□□□□□ -1.51
ACTN4O43707 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC5.64□□□□□ -1.51
ACTN4O43707 AC020890.1-201ENST00000491837 504 ntBASIC5.64□□□□□ -1.51
ACTN4O43707 RNU6-1234P-201ENST00000516877 103 ntBASIC5.64□□□□□ -1.51
ACTN4O43707 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.64□□□□□ -1.51
ACTN4O43707 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC5.64□□□□□ -1.51
ACTN4O43707 AL645944.1-201ENST00000603857 493 ntBASIC5.64□□□□□ -1.51
ACTN4O43707 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC5.64□□□□□ -1.51
ACTN4O43707 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
ACTN4O43707 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ACTN4O43707 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ACTN4O43707 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.64□□□□□ -1.51
ACTN4O43707 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
ACTN4O43707 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.64□□□□□ -1.51
ACTN4O43707 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ACTN4O43707 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.63□□□□□ -1.51
ACTN4O43707 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ACTN4O43707 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
ACTN4O43707 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
ACTN4O43707 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.63□□□□□ -1.51
ACTN4O43707 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ACTN4O43707 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ACTN4O43707 Y_RNA.121-201ENST00000363309 113 ntBASIC5.63□□□□□ -1.51
ACTN4O43707 RNU6-961P-201ENST00000363893 105 ntBASIC5.63□□□□□ -1.51
ACTN4O43707 MIR539-201ENST00000365690 78 ntBASIC5.63□□□□□ -1.51
ACTN4O43707 RNU6-541P-201ENST00000384709 110 ntBASIC5.63□□□□□ -1.51
ACTN4O43707 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC5.63□□□□□ -1.51
ACTN4O43707 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.63□□□□□ -1.51
ACTN4O43707 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC5.63□□□□□ -1.51
ACTN4O43707 AC096638.1-201ENST00000444678 216 ntBASIC5.63□□□□□ -1.51
ACTN4O43707 RPL23AP24-201ENST00000458203 385 ntBASIC5.63□□□□□ -1.51
ACTN4O43707 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.63□□□□□ -1.51
ACTN4O43707 COPS8P2-201ENST00000473228 627 ntBASIC5.63□□□□□ -1.51
ACTN4O43707 AC004980.4-201ENST00000513375 203 ntBASIC5.63□□□□□ -1.51
ACTN4O43707 ENPP7P9-201ENST00000514456 627 ntBASIC5.63□□□□□ -1.51
ACTN4O43707 SNORA25.12-201ENST00000516202 82 ntBASIC5.63□□□□□ -1.51
ACTN4O43707 SUMO2P18-201ENST00000518873 252 ntBASIC5.63□□□□□ -1.51
ACTN4O43707 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
ACTN4O43707 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC5.63□□□□□ -1.51
ACTN4O43707 AC105254.2-201ENST00000603636 436 ntBASIC5.63□□□□□ -1.51
ACTN4O43707 AL008718.3-201ENST00000610217 321 ntBASIC5.63□□□□□ -1.51
ACTN4O43707 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
ACTN4O43707 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ACTN4O43707 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
ACTN4O43707 SMG1P4-204ENST00000523028 4131 ntBASIC5.63□□□□□ -1.51
ACTN4O43707 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ACTN4O43707 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ACTN4O43707 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ACTN4O43707 SNORA63.4-201ENST00000362763 126 ntBASIC5.62□□□□□ -1.51
ACTN4O43707 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.62□□□□□ -1.51
ACTN4O43707 MIR513C-201ENST00000401352 84 ntBASIC5.62□□□□□ -1.51
ACTN4O43707 MTATP6P4-201ENST00000427725 675 ntBASIC5.62□□□□□ -1.51
ACTN4O43707 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.62□□□□□ -1.51
ACTN4O43707 TBCAP1-201ENST00000436520 327 ntBASIC5.62□□□□□ -1.51
ACTN4O43707 RPL34P20-201ENST00000442771 351 ntBASIC5.62□□□□□ -1.51
ACTN4O43707 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC5.62□□□□□ -1.51
ACTN4O43707 AC005176.2-201ENST00000596933 147 ntBASIC5.62□□□□□ -1.51
ACTN4O43707 AC126915.2-201ENST00000610957 190 ntBASIC5.62□□□□□ -1.51
ACTN4O43707 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.62□□□□□ -1.51
ACTN4O43707 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.62□□□□□ -1.51
ACTN4O43707 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.62□□□□□ -1.51
ACTN4O43707 AC008873.1-201ENST00000625051 138 ntBASIC5.62□□□□□ -1.51
ACTN4O43707 U4.7-201ENST00000638126 106 ntBASIC5.62□□□□□ -1.51
ACTN4O43707 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ACTN4O43707 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ACTN4O43707 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
ACTN4O43707 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.62□□□□□ -1.51
ACTN4O43707 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.62□□□□□ -1.51
ACTN4O43707 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
ACTN4O43707 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
ACTN4O43707 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ACTN4O43707 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
ACTN4O43707 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.62□□□□□ -1.51
ACTN4O43707 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ACTN4O43707 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.62□□□□□ -1.51
ACTN4O43707 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.61□□□□□ -1.51
ACTN4O43707 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.61□□□□□ -1.51
ACTN4O43707 PCAT14-202ENST00000627127 3935 ntBASIC5.61□□□□□ -1.51
ACTN4O43707 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ACTN4O43707 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms