Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 RNU6-6P-201ENST00000606623 107 ntBASIC5.7□□□□□ -1.5
ZC3H4Q9UPT8 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
ZC3H4Q9UPT8 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ZC3H4Q9UPT8 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ZC3H4Q9UPT8 NCAPGP1-201ENST00000505112 1814 ntBASIC5.69□□□□□ -1.5
ZC3H4Q9UPT8 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
ZC3H4Q9UPT8 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.69□□□□□ -1.5
ZC3H4Q9UPT8 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
ZC3H4Q9UPT8 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ZC3H4Q9UPT8 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.69□□□□□ -1.5
ZC3H4Q9UPT8 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.69□□□□□ -1.5
ZC3H4Q9UPT8 AC010300.1-201ENST00000600671 5134 ntBASIC5.69□□□□□ -1.5
ZC3H4Q9UPT8 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
ZC3H4Q9UPT8 Y_RNA.27-201ENST00000362540 103 ntBASIC5.69□□□□□ -1.5
ZC3H4Q9UPT8 RNU6-1266P-201ENST00000362794 105 ntBASIC5.69□□□□□ -1.5
ZC3H4Q9UPT8 Y_RNA.458-201ENST00000384240 102 ntBASIC5.69□□□□□ -1.5
ZC3H4Q9UPT8 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.69□□□□□ -1.5
ZC3H4Q9UPT8 AL035079.1-201ENST00000405210 287 ntBASIC5.69□□□□□ -1.5
ZC3H4Q9UPT8 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.69□□□□□ -1.5
ZC3H4Q9UPT8 RN7SL517P-201ENST00000462240 305 ntBASIC5.69□□□□□ -1.5
ZC3H4Q9UPT8 RPL21P126-201ENST00000470049 478 ntBASIC5.69□□□□□ -1.5
ZC3H4Q9UPT8 RN7SL132P-201ENST00000478131 296 ntBASIC5.69□□□□□ -1.5
ZC3H4Q9UPT8 HMGN1P11-201ENST00000508668 303 ntBASIC5.69□□□□□ -1.5
ZC3H4Q9UPT8 AC067942.3-201ENST00000512025 362 ntBASIC5.69□□□□□ -1.5
ZC3H4Q9UPT8 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC5.69□□□□□ -1.5
ZC3H4Q9UPT8 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC5.69□□□□□ -1.5
ZC3H4Q9UPT8 RNU6-1315P-201ENST00000517187 99 ntBASIC5.69□□□□□ -1.5
ZC3H4Q9UPT8 AC022868.1-201ENST00000517767 391 ntBASIC5.69□□□□□ -1.5
ZC3H4Q9UPT8 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.69□□□□□ -1.5
ZC3H4Q9UPT8 AC007458.1-201ENST00000542812 373 ntBASIC5.69□□□□□ -1.5
ZC3H4Q9UPT8 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.69□□□□□ -1.5
ZC3H4Q9UPT8 SNORA74C-1-201ENST00000580726 201 ntBASIC5.69□□□□□ -1.5
ZC3H4Q9UPT8 AC008962.1-201ENST00000605729 304 ntBASIC5.69□□□□□ -1.5
ZC3H4Q9UPT8 BX284668.6-201ENST00000606899 438 ntBASIC5.69□□□□□ -1.5
ZC3H4Q9UPT8 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.69□□□□□ -1.5
ZC3H4Q9UPT8 AC006065.5-201ENST00000623427 349 ntBASIC5.69□□□□□ -1.5
ZC3H4Q9UPT8 AC127459.3-201ENST00000624328 466 ntBASIC5.69□□□□□ -1.5
ZC3H4Q9UPT8 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ZC3H4Q9UPT8 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
ZC3H4Q9UPT8 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
ZC3H4Q9UPT8 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.68□□□□□ -1.5
ZC3H4Q9UPT8 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ZC3H4Q9UPT8 ANKRD36BP1-201ENST00000358576 1779 ntBASIC5.68□□□□□ -1.5
ZC3H4Q9UPT8 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ZC3H4Q9UPT8 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ZC3H4Q9UPT8 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ZC3H4Q9UPT8 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ZC3H4Q9UPT8 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.68□□□□□ -1.5
ZC3H4Q9UPT8 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.68□□□□□ -1.5
ZC3H4Q9UPT8 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
ZC3H4Q9UPT8 RNA5SP387-201ENST00000364226 106 ntBASIC5.68□□□□□ -1.5
ZC3H4Q9UPT8 RNU6-512P-201ENST00000364438 103 ntBASIC5.68□□□□□ -1.5
ZC3H4Q9UPT8 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.68□□□□□ -1.5
ZC3H4Q9UPT8 Y_RNA.439-201ENST00000384119 94 ntBASIC5.68□□□□□ -1.5
ZC3H4Q9UPT8 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.68□□□□□ -1.5
ZC3H4Q9UPT8 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC5.68□□□□□ -1.5
ZC3H4Q9UPT8 AL591043.1-201ENST00000432461 424 ntBASIC5.68□□□□□ -1.5
ZC3H4Q9UPT8 AC079168.2-201ENST00000453977 416 ntBASIC5.68□□□□□ -1.5
ZC3H4Q9UPT8 RNU7-87P-201ENST00000459343 62 ntBASIC5.68□□□□□ -1.5
ZC3H4Q9UPT8 AC022493.1-201ENST00000492984 337 ntBASIC5.68□□□□□ -1.5
ZC3H4Q9UPT8 SCARNA24.2-201ENST00000516968 130 ntBASIC5.68□□□□□ -1.5
ZC3H4Q9UPT8 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.68□□□□□ -1.5
ZC3H4Q9UPT8 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC5.68□□□□□ -1.5
ZC3H4Q9UPT8 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC5.68□□□□□ -1.5
ZC3H4Q9UPT8 AC022884.2-201ENST00000578535 580 ntBASIC5.68□□□□□ -1.5
ZC3H4Q9UPT8 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.68□□□□□ -1.5
ZC3H4Q9UPT8 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.68□□□□□ -1.5
ZC3H4Q9UPT8 AC091903.1-201ENST00000624322 454 ntBASIC5.68□□□□□ -1.5
ZC3H4Q9UPT8 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC5.68□□□□□ -1.5
ZC3H4Q9UPT8 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
ZC3H4Q9UPT8 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.68□□□□□ -1.5
ZC3H4Q9UPT8 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.68□□□□□ -1.5
ZC3H4Q9UPT8 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ZC3H4Q9UPT8 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
ZC3H4Q9UPT8 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
ZC3H4Q9UPT8 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
ZC3H4Q9UPT8 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
ZC3H4Q9UPT8 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
ZC3H4Q9UPT8 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ZC3H4Q9UPT8 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.67□□□□□ -1.5
ZC3H4Q9UPT8 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.67□□□□□ -1.5
ZC3H4Q9UPT8 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ZC3H4Q9UPT8 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.67□□□□□ -1.5
ZC3H4Q9UPT8 snoU2_19.2-201ENST00000363024 80 ntBASIC5.67□□□□□ -1.5
ZC3H4Q9UPT8 RNU6-827P-201ENST00000365553 106 ntBASIC5.67□□□□□ -1.5
ZC3H4Q9UPT8 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
ZC3H4Q9UPT8 RNU1-82P-201ENST00000390851 165 ntBASIC5.67□□□□□ -1.5
ZC3H4Q9UPT8 RNU6-837P-201ENST00000391056 108 ntBASIC5.67□□□□□ -1.5
ZC3H4Q9UPT8 MIR1298-201ENST00000408783 112 ntBASIC5.67□□□□□ -1.5
ZC3H4Q9UPT8 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.67□□□□□ -1.5
ZC3H4Q9UPT8 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.67□□□□□ -1.5
ZC3H4Q9UPT8 PRSS3P4-201ENST00000453323 162 ntBASIC5.67□□□□□ -1.5
ZC3H4Q9UPT8 AC087190.1-201ENST00000484462 480 ntBASIC5.67□□□□□ -1.5
ZC3H4Q9UPT8 AC107032.1-201ENST00000485945 480 ntBASIC5.67□□□□□ -1.5
ZC3H4Q9UPT8 RNU6-1338P-201ENST00000516328 91 ntBASIC5.67□□□□□ -1.5
ZC3H4Q9UPT8 RNU4-60P-201ENST00000517239 135 ntBASIC5.67□□□□□ -1.5
ZC3H4Q9UPT8 AC008694.2-201ENST00000517591 306 ntBASIC5.67□□□□□ -1.5
ZC3H4Q9UPT8 AL157871.3-201ENST00000557231 293 ntBASIC5.67□□□□□ -1.5
ZC3H4Q9UPT8 RN7SL176P-201ENST00000580352 264 ntBASIC5.67□□□□□ -1.5
ZC3H4Q9UPT8 AC034102.8-201ENST00000615146 484 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms