Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.81□□□□□ -1.8
SSBP3Q9BWW4 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.81□□□□□ -1.8
SSBP3Q9BWW4 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SSBP3Q9BWW4 RNU6-989P-201ENST00000362756 107 ntBASIC3.81□□□□□ -1.8
SSBP3Q9BWW4 SNORD58.1-201ENST00000391313 66 ntBASIC3.81□□□□□ -1.8
SSBP3Q9BWW4 MRPL35P1-201ENST00000404272 572 ntBASIC3.81□□□□□ -1.8
SSBP3Q9BWW4 Y_RNA.793-201ENST00000411222 111 ntBASIC3.81□□□□□ -1.8
SSBP3Q9BWW4 RPS12P10-201ENST00000427031 377 ntBASIC3.81□□□□□ -1.8
SSBP3Q9BWW4 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.81□□□□□ -1.8
SSBP3Q9BWW4 RPL23AP1-201ENST00000428990 471 ntBASIC3.81□□□□□ -1.8
SSBP3Q9BWW4 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.81□□□□□ -1.8
SSBP3Q9BWW4 AL513124.1-201ENST00000450410 614 ntBASIC3.81□□□□□ -1.8
SSBP3Q9BWW4 NDUFB4P10-201ENST00000452541 359 ntBASIC3.81□□□□□ -1.8
SSBP3Q9BWW4 AC010683.1-201ENST00000473673 378 ntBASIC3.81□□□□□ -1.8
SSBP3Q9BWW4 HMGN2P13-201ENST00000476476 274 ntBASIC3.81□□□□□ -1.8
SSBP3Q9BWW4 RPS15AP34-201ENST00000487776 387 ntBASIC3.81□□□□□ -1.8
SSBP3Q9BWW4 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.81□□□□□ -1.8
SSBP3Q9BWW4 OR51K1P-201ENST00000510214 950 ntBASIC3.81□□□□□ -1.8
SSBP3Q9BWW4 DEFB108E-201ENST00000524692 240 ntBASIC3.81□□□□□ -1.8
SSBP3Q9BWW4 HNRNPCP4-201ENST00000571636 900 ntBASIC3.81□□□□□ -1.8
SSBP3Q9BWW4 MIR548AC-201ENST00000585049 88 ntBASIC3.81□□□□□ -1.8
SSBP3Q9BWW4 AL450472.3-201ENST00000615578 367 ntBASIC3.81□□□□□ -1.8
SSBP3Q9BWW4 AL450472.1-202ENST00000637286 180 ntBASIC3.81□□□□□ -1.8
SSBP3Q9BWW4 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SSBP3Q9BWW4 AC087190.4-201ENST00000574616 8334 ntBASIC3.81□□□□□ -1.8
SSBP3Q9BWW4 AP001273.1-201ENST00000624493 3152 ntBASIC3.81□□□□□ -1.8
SSBP3Q9BWW4 AL391684.1-202ENST00000641293 1636 ntBASIC3.81□□□□□ -1.8
SSBP3Q9BWW4 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 U8.8-201ENST00000365399 135 ntBASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 SNORD96B-201ENST00000386148 79 ntBASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 U3.42-201ENST00000408746 214 ntBASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 Y_RNA.592-201ENST00000410274 109 ntBASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 RNU2-33P-201ENST00000410344 192 ntBASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 RNU6-130P-201ENST00000411112 103 ntBASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 RNU6-607P-201ENST00000411283 108 ntBASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 CYCSP10-201ENST00000417973 294 ntBASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 RPL23AP25-201ENST00000430973 463 ntBASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 RPL23AP93-201ENST00000440847 484 ntBASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 PTMAP3-201ENST00000447474 330 ntBASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 PRDX3P3-201ENST00000447765 522 ntBASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 ISCUP1-201ENST00000454451 448 ntBASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 RPS27AP13-201ENST00000498403 237 ntBASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 SNORA31.3-201ENST00000516029 96 ntBASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 RNU6-914P-201ENST00000516749 109 ntBASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 Y_RNA.713-201ENST00000517013 96 ntBASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 RNU6-840P-201ENST00000517275 65 ntBASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 SNRPGP16-201ENST00000533275 226 ntBASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 TRAV32-201ENST00000553993 340 ntBASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 LRRC37A5P-203ENST00000580181 585 ntBASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 AL158827.2-201ENST00000602494 330 ntBASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 AL691447.3-201ENST00000635020 330 ntBASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SSBP3Q9BWW4 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 BBX-203ENST00000402543 3980 ntTSL 5 BASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 DHX9P1-201ENST00000436565 3076 ntBASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 ZNF285B-201ENST00000561698 1767 ntBASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 ARHGAP42P3-201ENST00000443989 2508 ntBASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 AC021146.4-201ENST00000309229 279 ntBASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 SNORD81.1-201ENST00000363064 77 ntBASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 Y_RNA.277-201ENST00000364754 102 ntBASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 Y_RNA.324-201ENST00000365165 102 ntBASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 MIR578-201ENST00000384828 96 ntBASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 MIR135A2-201ENST00000384854 100 ntBASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 MIR215-201ENST00000384858 110 ntBASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 MIR1298-201ENST00000408783 112 ntBASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 AL139156.1-201ENST00000412785 841 ntBASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 RPEP3-201ENST00000425462 676 ntBASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 ELOCP18-201ENST00000434209 337 ntBASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 AL360271.2-201ENST00000447710 161 ntBASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 Y_RNA.644-201ENST00000459006 113 ntBASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 RNU6-1037P-201ENST00000459571 107 ntBASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 AC008958.1-201ENST00000511047 682 ntBASIC3.79□□□□□ -1.8
SSBP3Q9BWW4 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms