Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 RNU6-1336P-201ENST00000383886 109 ntBASIC5.6□□□□□ -1.51
LHX6Q9UPM6 MIR450A2-201ENST00000385022 100 ntBASIC5.6□□□□□ -1.51
LHX6Q9UPM6 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
LHX6Q9UPM6 RPS16P5-201ENST00000406501 404 ntBASIC5.6□□□□□ -1.51
LHX6Q9UPM6 RN7SKP27-201ENST00000410684 333 ntBASIC5.6□□□□□ -1.51
LHX6Q9UPM6 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC5.6□□□□□ -1.51
LHX6Q9UPM6 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC5.6□□□□□ -1.51
LHX6Q9UPM6 PSMD10P3-201ENST00000437000 448 ntBASIC5.6□□□□□ -1.51
LHX6Q9UPM6 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.6□□□□□ -1.51
LHX6Q9UPM6 SNRPGP7-201ENST00000469016 106 ntBASIC5.6□□□□□ -1.51
LHX6Q9UPM6 RN7SL222P-201ENST00000476452 299 ntBASIC5.6□□□□□ -1.51
LHX6Q9UPM6 PPP1R11P1-201ENST00000486095 376 ntBASIC5.6□□□□□ -1.51
LHX6Q9UPM6 RNU6-615P-201ENST00000516065 106 ntBASIC5.6□□□□□ -1.51
LHX6Q9UPM6 RNU6-1146P-201ENST00000516282 102 ntBASIC5.6□□□□□ -1.51
LHX6Q9UPM6 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC5.6□□□□□ -1.51
LHX6Q9UPM6 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.6□□□□□ -1.51
LHX6Q9UPM6 AL031274.2-201ENST00000599419 203 ntBASIC5.6□□□□□ -1.51
LHX6Q9UPM6 AC091193.1-201ENST00000604640 448 ntBASIC5.6□□□□□ -1.51
LHX6Q9UPM6 U6.99-201ENST00000637524 83 ntBASIC5.6□□□□□ -1.51
LHX6Q9UPM6 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LHX6Q9UPM6 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.6□□□□□ -1.51
LHX6Q9UPM6 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LHX6Q9UPM6 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LHX6Q9UPM6 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC5.6□□□□□ -1.51
LHX6Q9UPM6 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LHX6Q9UPM6 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
LHX6Q9UPM6 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LHX6Q9UPM6 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC5.6□□□□□ -1.51
LHX6Q9UPM6 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.59□□□□□ -1.51
LHX6Q9UPM6 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LHX6Q9UPM6 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
LHX6Q9UPM6 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
LHX6Q9UPM6 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.59□□□□□ -1.51
LHX6Q9UPM6 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LHX6Q9UPM6 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LHX6Q9UPM6 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.59□□□□□ -1.51
LHX6Q9UPM6 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LHX6Q9UPM6 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
LHX6Q9UPM6 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LHX6Q9UPM6 Y_RNA.310-201ENST00000365063 113 ntBASIC5.59□□□□□ -1.51
LHX6Q9UPM6 SNORA51.8-201ENST00000384234 132 ntBASIC5.59□□□□□ -1.51
LHX6Q9UPM6 MIR29B2-201ENST00000385055 81 ntBASIC5.59□□□□□ -1.51
LHX6Q9UPM6 MIR1302-5-201ENST00000408164 150 ntBASIC5.59□□□□□ -1.51
LHX6Q9UPM6 RNU6-855P-201ENST00000410395 104 ntBASIC5.59□□□□□ -1.51
LHX6Q9UPM6 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.59□□□□□ -1.51
LHX6Q9UPM6 AC078809.1-201ENST00000427601 140 ntBASIC5.59□□□□□ -1.51
LHX6Q9UPM6 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.59□□□□□ -1.51
LHX6Q9UPM6 RN7SL269P-201ENST00000467795 305 ntBASIC5.59□□□□□ -1.51
LHX6Q9UPM6 RN7SL583P-201ENST00000475692 287 ntBASIC5.59□□□□□ -1.51
LHX6Q9UPM6 AC083982.1-201ENST00000485679 344 ntBASIC5.59□□□□□ -1.51
LHX6Q9UPM6 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.59□□□□□ -1.51
LHX6Q9UPM6 AC131055.1-201ENST00000584626 316 ntBASIC5.59□□□□□ -1.51
LHX6Q9UPM6 AL356575.1-201ENST00000603008 283 ntBASIC5.59□□□□□ -1.51
LHX6Q9UPM6 AC018628.1-201ENST00000624147 3819 ntBASIC5.59□□□□□ -1.51
LHX6Q9UPM6 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
LHX6Q9UPM6 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LHX6Q9UPM6 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
LHX6Q9UPM6 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
LHX6Q9UPM6 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
LHX6Q9UPM6 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.59□□□□□ -1.51
LHX6Q9UPM6 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
LHX6Q9UPM6 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
LHX6Q9UPM6 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.59□□□□□ -1.52
LHX6Q9UPM6 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
LHX6Q9UPM6 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
LHX6Q9UPM6 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.58□□□□□ -1.52
LHX6Q9UPM6 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LHX6Q9UPM6 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC5.58□□□□□ -1.52
LHX6Q9UPM6 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LHX6Q9UPM6 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LHX6Q9UPM6 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LHX6Q9UPM6 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
LHX6Q9UPM6 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
LHX6Q9UPM6 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC5.58□□□□□ -1.52
LHX6Q9UPM6 AC073073.2-201ENST00000609827 2578 ntBASIC5.58□□□□□ -1.52
LHX6Q9UPM6 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LHX6Q9UPM6 AC092268.1-201ENST00000342691 405 ntBASIC5.58□□□□□ -1.52
LHX6Q9UPM6 DEFB108F-201ENST00000344638 222 ntBASIC5.58□□□□□ -1.52
LHX6Q9UPM6 RNU6-727P-201ENST00000363592 107 ntBASIC5.58□□□□□ -1.52
LHX6Q9UPM6 SNORA43.1-201ENST00000364863 140 ntBASIC5.58□□□□□ -1.52
LHX6Q9UPM6 MIR488-201ENST00000365739 83 ntBASIC5.58□□□□□ -1.52
LHX6Q9UPM6 RNU6-1074P-201ENST00000383995 104 ntBASIC5.58□□□□□ -1.52
LHX6Q9UPM6 SNORA51.10-201ENST00000384418 136 ntBASIC5.58□□□□□ -1.52
LHX6Q9UPM6 AC007969.2-201ENST00000441891 191 ntBASIC5.58□□□□□ -1.52
LHX6Q9UPM6 PPIAP21-201ENST00000464473 501 ntBASIC5.58□□□□□ -1.52
LHX6Q9UPM6 Y_RNA.690-201ENST00000516603 95 ntBASIC5.58□□□□□ -1.52
LHX6Q9UPM6 HMGN2P36-201ENST00000529541 409 ntBASIC5.58□□□□□ -1.52
LHX6Q9UPM6 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LHX6Q9UPM6 AL110118.1-201ENST00000553543 400 ntBASIC5.58□□□□□ -1.52
LHX6Q9UPM6 RN7SL52P-201ENST00000584271 284 ntBASIC5.58□□□□□ -1.52
LHX6Q9UPM6 SNORD84-203ENST00000584275 78 ntBASIC5.58□□□□□ -1.52
LHX6Q9UPM6 AL020997.2-201ENST00000602607 184 ntBASIC5.58□□□□□ -1.52
LHX6Q9UPM6 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.58□□□□□ -1.52
LHX6Q9UPM6 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.58□□□□□ -1.52
LHX6Q9UPM6 RN7SL722P-201ENST00000617780 284 ntBASIC5.58□□□□□ -1.52
LHX6Q9UPM6 RN7SL565P-201ENST00000618246 284 ntBASIC5.58□□□□□ -1.52
LHX6Q9UPM6 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC5.58□□□□□ -1.52
LHX6Q9UPM6 AC025470.1-201ENST00000510053 2032 ntBASIC5.58□□□□□ -1.52
LHX6Q9UPM6 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
LHX6Q9UPM6 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms