Protein–RNA interactions for Protein: Q96JQ5

MS4A4A, Membrane-spanning 4-domains subfamily A member 4A, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4AQ96JQ5 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
MS4A4AQ96JQ5 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.09□□□□□ -1.43
MS4A4AQ96JQ5 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
MS4A4AQ96JQ5 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
MS4A4AQ96JQ5 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
MS4A4AQ96JQ5 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
MS4A4AQ96JQ5 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
MS4A4AQ96JQ5 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
MS4A4AQ96JQ5 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC6.09□□□□□ -1.43
MS4A4AQ96JQ5 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
MS4A4AQ96JQ5 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
MS4A4AQ96JQ5 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.09□□□□□ -1.43
MS4A4AQ96JQ5 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.09□□□□□ -1.43
MS4A4AQ96JQ5 RNU1-140P-201ENST00000365040 165 ntBASIC6.09□□□□□ -1.43
MS4A4AQ96JQ5 RNA5SP428-201ENST00000365129 132 ntBASIC6.09□□□□□ -1.43
MS4A4AQ96JQ5 RNU6-32P-201ENST00000383948 107 ntBASIC6.09□□□□□ -1.43
MS4A4AQ96JQ5 RNU6-13P-201ENST00000384248 107 ntBASIC6.09□□□□□ -1.43
MS4A4AQ96JQ5 RNU6-12P-201ENST00000384604 107 ntBASIC6.09□□□□□ -1.43
MS4A4AQ96JQ5 RNU6-41P-201ENST00000384741 107 ntBASIC6.09□□□□□ -1.43
MS4A4AQ96JQ5 RPS16P5-201ENST00000406501 404 ntBASIC6.09□□□□□ -1.43
MS4A4AQ96JQ5 MIR320B2-201ENST00000408479 138 ntBASIC6.09□□□□□ -1.43
MS4A4AQ96JQ5 RN7SKP284-201ENST00000411002 343 ntBASIC6.09□□□□□ -1.43
MS4A4AQ96JQ5 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC6.09□□□□□ -1.43
MS4A4AQ96JQ5 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC6.09□□□□□ -1.43
MS4A4AQ96JQ5 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.09□□□□□ -1.43
MS4A4AQ96JQ5 AC140172.1-201ENST00000502928 141 ntBASIC6.09□□□□□ -1.43
MS4A4AQ96JQ5 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.09□□□□□ -1.43
MS4A4AQ96JQ5 AL356575.1-201ENST00000603008 283 ntBASIC6.09□□□□□ -1.43
MS4A4AQ96JQ5 AL670379.3-201ENST00000605040 251 ntBASIC6.09□□□□□ -1.43
MS4A4AQ96JQ5 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC6.09□□□□□ -1.43
MS4A4AQ96JQ5 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
MS4A4AQ96JQ5 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
MS4A4AQ96JQ5 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
MS4A4AQ96JQ5 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
MS4A4AQ96JQ5 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
MS4A4AQ96JQ5 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
MS4A4AQ96JQ5 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
MS4A4AQ96JQ5 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
MS4A4AQ96JQ5 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC6.08□□□□□ -1.44
MS4A4AQ96JQ5 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
MS4A4AQ96JQ5 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
MS4A4AQ96JQ5 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC6.08□□□□□ -1.44
MS4A4AQ96JQ5 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
MS4A4AQ96JQ5 AP000432.2-201ENST00000624164 2048 ntBASIC6.08□□□□□ -1.44
MS4A4AQ96JQ5 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
MS4A4AQ96JQ5 RNU6-728P-201ENST00000365375 104 ntBASIC6.08□□□□□ -1.44
MS4A4AQ96JQ5 RNU6-768P-201ENST00000384683 107 ntBASIC6.08□□□□□ -1.44
MS4A4AQ96JQ5 RNU6-1228P-201ENST00000391014 107 ntBASIC6.08□□□□□ -1.44
MS4A4AQ96JQ5 SNORA26.5-201ENST00000391215 123 ntBASIC6.08□□□□□ -1.44
MS4A4AQ96JQ5 YPEL5P1-201ENST00000419731 367 ntBASIC6.08□□□□□ -1.44
MS4A4AQ96JQ5 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC6.08□□□□□ -1.44
MS4A4AQ96JQ5 SNRPEP9-201ENST00000436794 238 ntBASIC6.08□□□□□ -1.44
MS4A4AQ96JQ5 SNORD125-201ENST00000459538 96 ntBASIC6.08□□□□□ -1.44
MS4A4AQ96JQ5 SNRPGP7-201ENST00000469016 106 ntBASIC6.08□□□□□ -1.44
MS4A4AQ96JQ5 RN7SL354P-201ENST00000469282 294 ntBASIC6.08□□□□□ -1.44
MS4A4AQ96JQ5 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC6.08□□□□□ -1.44
MS4A4AQ96JQ5 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC6.08□□□□□ -1.44
MS4A4AQ96JQ5 SNORD116-26-201ENST00000516006 96 ntBASIC6.08□□□□□ -1.44
MS4A4AQ96JQ5 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.08□□□□□ -1.44
MS4A4AQ96JQ5 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.08□□□□□ -1.44
MS4A4AQ96JQ5 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.08□□□□□ -1.44
MS4A4AQ96JQ5 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.08□□□□□ -1.44
MS4A4AQ96JQ5 AC009779.8-201ENST00000641684 4384 ntBASIC6.08□□□□□ -1.44
MS4A4AQ96JQ5 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
MS4A4AQ96JQ5 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
MS4A4AQ96JQ5 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.07□□□□□ -1.44
MS4A4AQ96JQ5 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
MS4A4AQ96JQ5 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.07□□□□□ -1.44
MS4A4AQ96JQ5 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
MS4A4AQ96JQ5 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
MS4A4AQ96JQ5 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC6.07□□□□□ -1.44
MS4A4AQ96JQ5 AC073073.2-201ENST00000609827 2578 ntBASIC6.07□□□□□ -1.44
MS4A4AQ96JQ5 RNU4-10P-201ENST00000364383 140 ntBASIC6.07□□□□□ -1.44
MS4A4AQ96JQ5 AC068538.1-201ENST00000376856 336 ntBASIC6.07□□□□□ -1.44
MS4A4AQ96JQ5 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC6.07□□□□□ -1.44
MS4A4AQ96JQ5 RPS29P24-201ENST00000486345 171 ntBASIC6.07□□□□□ -1.44
MS4A4AQ96JQ5 RPL31P61-201ENST00000496160 376 ntBASIC6.07□□□□□ -1.44
MS4A4AQ96JQ5 AC023818.1-201ENST00000498379 384 ntBASIC6.07□□□□□ -1.44
MS4A4AQ96JQ5 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
MS4A4AQ96JQ5 SCARNA8-201ENST00000515924 131 ntBASIC6.07□□□□□ -1.44
MS4A4AQ96JQ5 RNU6-772P-201ENST00000516042 105 ntBASIC6.07□□□□□ -1.44
MS4A4AQ96JQ5 RNU6-453P-201ENST00000516819 85 ntBASIC6.07□□□□□ -1.44
MS4A4AQ96JQ5 RN7SKP260-201ENST00000516907 149 ntBASIC6.07□□□□□ -1.44
MS4A4AQ96JQ5 RNU2-12P-201ENST00000517216 168 ntBASIC6.07□□□□□ -1.44
MS4A4AQ96JQ5 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
MS4A4AQ96JQ5 CYCSP39-201ENST00000565821 309 ntBASIC6.07□□□□□ -1.44
MS4A4AQ96JQ5 MIR6758-201ENST00000620653 63 ntBASIC6.07□□□□□ -1.44
MS4A4AQ96JQ5 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
MS4A4AQ96JQ5 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
MS4A4AQ96JQ5 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC6.07□□□□□ -1.44
MS4A4AQ96JQ5 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC6.07□□□□□ -1.44
MS4A4AQ96JQ5 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.06□□□□□ -1.44
MS4A4AQ96JQ5 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.06□□□□□ -1.44
MS4A4AQ96JQ5 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
MS4A4AQ96JQ5 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
MS4A4AQ96JQ5 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
MS4A4AQ96JQ5 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
MS4A4AQ96JQ5 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.06□□□□□ -1.44
MS4A4AQ96JQ5 SNORD56.1-201ENST00000362913 68 ntBASIC6.06□□□□□ -1.44
MS4A4AQ96JQ5 RNU6-942P-201ENST00000363002 107 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms