Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
MS4A3Q96HJ5 LCOR-201ENST00000286067 4542 ntBASIC5.76□□□□□ -1.49
MS4A3Q96HJ5 AC002543.1-201ENST00000299783 1954 ntBASIC5.76□□□□□ -1.49
MS4A3Q96HJ5 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.76□□□□□ -1.49
MS4A3Q96HJ5 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
MS4A3Q96HJ5 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.76□□□□□ -1.49
MS4A3Q96HJ5 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.76□□□□□ -1.49
MS4A3Q96HJ5 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
MS4A3Q96HJ5 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
MS4A3Q96HJ5 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
MS4A3Q96HJ5 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.76□□□□□ -1.49
MS4A3Q96HJ5 RNU6-778P-201ENST00000363269 103 ntBASIC5.76□□□□□ -1.49
MS4A3Q96HJ5 U3.52-201ENST00000384034 216 ntBASIC5.76□□□□□ -1.49
MS4A3Q96HJ5 AL033519.1-201ENST00000407266 307 ntBASIC5.76□□□□□ -1.49
MS4A3Q96HJ5 NDUFB1P1-201ENST00000435191 180 ntBASIC5.76□□□□□ -1.49
MS4A3Q96HJ5 AC015524.1-201ENST00000491585 472 ntBASIC5.76□□□□□ -1.49
MS4A3Q96HJ5 RNU6-1149P-201ENST00000516810 97 ntBASIC5.76□□□□□ -1.49
MS4A3Q96HJ5 IGHVIII-67-2-201ENST00000519849 88 ntBASIC5.76□□□□□ -1.49
MS4A3Q96HJ5 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC5.76□□□□□ -1.49
MS4A3Q96HJ5 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.76□□□□□ -1.49
MS4A3Q96HJ5 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.76□□□□□ -1.49
MS4A3Q96HJ5 AC211486.4-201ENST00000621495 113 ntBASIC5.76□□□□□ -1.49
MS4A3Q96HJ5 MIR6503-201ENST00000622884 86 ntBASIC5.76□□□□□ -1.49
MS4A3Q96HJ5 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
MS4A3Q96HJ5 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
MS4A3Q96HJ5 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.76□□□□□ -1.49
MS4A3Q96HJ5 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
MS4A3Q96HJ5 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
MS4A3Q96HJ5 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
MS4A3Q96HJ5 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
MS4A3Q96HJ5 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.76□□□□□ -1.49
MS4A3Q96HJ5 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
MS4A3Q96HJ5 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
MS4A3Q96HJ5 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.75□□□□□ -1.49
MS4A3Q96HJ5 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
MS4A3Q96HJ5 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
MS4A3Q96HJ5 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
MS4A3Q96HJ5 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.75□□□□□ -1.49
MS4A3Q96HJ5 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
MS4A3Q96HJ5 MIR133A2-201ENST00000347538 102 ntBASIC5.75□□□□□ -1.49
MS4A3Q96HJ5 RNU6-146P-201ENST00000384602 108 ntBASIC5.75□□□□□ -1.49
MS4A3Q96HJ5 SNORD94-201ENST00000386037 137 ntBASIC5.75□□□□□ -1.49
MS4A3Q96HJ5 MIR889-201ENST00000401280 79 ntBASIC5.75□□□□□ -1.49
MS4A3Q96HJ5 AL121890.1-201ENST00000435457 205 ntBASIC5.75□□□□□ -1.49
MS4A3Q96HJ5 AC093663.1-201ENST00000497190 394 ntBASIC5.75□□□□□ -1.49
MS4A3Q96HJ5 AC093815.1-201ENST00000508637 280 ntBASIC5.75□□□□□ -1.49
MS4A3Q96HJ5 RNU6-240P-201ENST00000516098 97 ntBASIC5.75□□□□□ -1.49
MS4A3Q96HJ5 RNU6-162P-201ENST00000516228 103 ntBASIC5.75□□□□□ -1.49
MS4A3Q96HJ5 RNU6-941P-201ENST00000516346 108 ntBASIC5.75□□□□□ -1.49
MS4A3Q96HJ5 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.75□□□□□ -1.49
MS4A3Q96HJ5 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC5.75□□□□□ -1.49
MS4A3Q96HJ5 RPL23AP91-201ENST00000569211 455 ntBASIC5.75□□□□□ -1.49
MS4A3Q96HJ5 AC106785.4-201ENST00000569492 412 ntBASIC5.75□□□□□ -1.49
MS4A3Q96HJ5 MTND6P33-201ENST00000571794 183 ntBASIC5.75□□□□□ -1.49
MS4A3Q96HJ5 MIR4732-201ENST00000581873 76 ntBASIC5.75□□□□□ -1.49
MS4A3Q96HJ5 AC108738.1-201ENST00000603703 237 ntBASIC5.75□□□□□ -1.49
MS4A3Q96HJ5 PCGEM1.1-201ENST00000613431 131 ntBASIC5.75□□□□□ -1.49
MS4A3Q96HJ5 AC074140.1-201ENST00000621617 208 ntBASIC5.75□□□□□ -1.49
MS4A3Q96HJ5 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
MS4A3Q96HJ5 AC020658.2-201ENST00000559030 4020 ntBASIC5.75□□□□□ -1.49
MS4A3Q96HJ5 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
MS4A3Q96HJ5 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
MS4A3Q96HJ5 AC126323.6-202ENST00000568092 3511 ntBASIC5.75□□□□□ -1.49
MS4A3Q96HJ5 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
MS4A3Q96HJ5 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
MS4A3Q96HJ5 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
MS4A3Q96HJ5 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.74□□□□□ -1.49
MS4A3Q96HJ5 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
MS4A3Q96HJ5 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
MS4A3Q96HJ5 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.74□□□□□ -1.49
MS4A3Q96HJ5 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.74□□□□□ -1.49
MS4A3Q96HJ5 RNU6-271P-201ENST00000363858 105 ntBASIC5.74□□□□□ -1.49
MS4A3Q96HJ5 RNU6-644P-201ENST00000391155 98 ntBASIC5.74□□□□□ -1.49
MS4A3Q96HJ5 RNA5SP201-201ENST00000410316 124 ntBASIC5.74□□□□□ -1.49
MS4A3Q96HJ5 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.74□□□□□ -1.49
MS4A3Q96HJ5 AL929472.1-201ENST00000417484 429 ntBASIC5.74□□□□□ -1.49
MS4A3Q96HJ5 RPS26P55-201ENST00000471178 356 ntBASIC5.74□□□□□ -1.49
MS4A3Q96HJ5 RPS26P48-201ENST00000491713 339 ntBASIC5.74□□□□□ -1.49
MS4A3Q96HJ5 RNU7-149P-201ENST00000516739 59 ntBASIC5.74□□□□□ -1.49
MS4A3Q96HJ5 RN7SKP209-201ENST00000516888 304 ntBASIC5.74□□□□□ -1.49
MS4A3Q96HJ5 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.74□□□□□ -1.49
MS4A3Q96HJ5 MIR4420-201ENST00000583944 77 ntBASIC5.74□□□□□ -1.49
MS4A3Q96HJ5 Six3os1_7.1-201ENST00000621512 201 ntBASIC5.74□□□□□ -1.49
MS4A3Q96HJ5 MIR6813-201ENST00000621638 56 ntBASIC5.74□□□□□ -1.49
MS4A3Q96HJ5 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
MS4A3Q96HJ5 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
MS4A3Q96HJ5 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
MS4A3Q96HJ5 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
MS4A3Q96HJ5 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC5.74□□□□□ -1.49
MS4A3Q96HJ5 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC5.74□□□□□ -1.49
MS4A3Q96HJ5 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC5.74□□□□□ -1.49
MS4A3Q96HJ5 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.74□□□□□ -1.49
MS4A3Q96HJ5 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
MS4A3Q96HJ5 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
MS4A3Q96HJ5 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
MS4A3Q96HJ5 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC5.73□□□□□ -1.49
MS4A3Q96HJ5 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
MS4A3Q96HJ5 ERG-202ENST00000398897 4651 ntTSL 5 BASIC5.73□□□□□ -1.49
MS4A3Q96HJ5 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
MS4A3Q96HJ5 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms