Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CNTNAP3BQ96NU0 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CNTNAP3BQ96NU0 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CNTNAP3BQ96NU0 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
CNTNAP3BQ96NU0 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CNTNAP3BQ96NU0 AL078621.3-201ENST00000623707 2042 ntBASIC5.13□□□□□ -1.59
CNTNAP3BQ96NU0 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
CNTNAP3BQ96NU0 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CNTNAP3BQ96NU0 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.12□□□□□ -1.59
CNTNAP3BQ96NU0 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CNTNAP3BQ96NU0 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CNTNAP3BQ96NU0 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CNTNAP3BQ96NU0 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CNTNAP3BQ96NU0 RNU6-476P-201ENST00000384726 107 ntBASIC5.12□□□□□ -1.59
CNTNAP3BQ96NU0 MIR135A2-201ENST00000384854 100 ntBASIC5.12□□□□□ -1.59
CNTNAP3BQ96NU0 RNU6-239P-201ENST00000390990 99 ntBASIC5.12□□□□□ -1.59
CNTNAP3BQ96NU0 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC5.12□□□□□ -1.59
CNTNAP3BQ96NU0 AC024067.1-201ENST00000426199 223 ntBASIC5.12□□□□□ -1.59
CNTNAP3BQ96NU0 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC5.12□□□□□ -1.59
CNTNAP3BQ96NU0 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC5.12□□□□□ -1.59
CNTNAP3BQ96NU0 AL357134.1-201ENST00000445848 426 ntBASIC5.12□□□□□ -1.59
CNTNAP3BQ96NU0 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.12□□□□□ -1.59
CNTNAP3BQ96NU0 SNORA25.12-201ENST00000516202 82 ntBASIC5.12□□□□□ -1.59
CNTNAP3BQ96NU0 SNORA67.7-201ENST00000516664 135 ntBASIC5.12□□□□□ -1.59
CNTNAP3BQ96NU0 Y_RNA.694-201ENST00000516677 117 ntBASIC5.12□□□□□ -1.59
CNTNAP3BQ96NU0 RNU6-840P-201ENST00000517275 65 ntBASIC5.12□□□□□ -1.59
CNTNAP3BQ96NU0 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.12□□□□□ -1.59
CNTNAP3BQ96NU0 RN7SL652P-201ENST00000577769 300 ntBASIC5.12□□□□□ -1.59
CNTNAP3BQ96NU0 MIR3667-201ENST00000581025 74 ntBASIC5.12□□□□□ -1.59
CNTNAP3BQ96NU0 RPL23AP78-201ENST00000599928 470 ntBASIC5.12□□□□□ -1.59
CNTNAP3BQ96NU0 AL450472.3-201ENST00000615578 367 ntBASIC5.12□□□□□ -1.59
CNTNAP3BQ96NU0 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC5.12□□□□□ -1.59
CNTNAP3BQ96NU0 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.12□□□□□ -1.59
CNTNAP3BQ96NU0 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CNTNAP3BQ96NU0 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CNTNAP3BQ96NU0 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CNTNAP3BQ96NU0 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CNTNAP3BQ96NU0 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.12□□□□□ -1.59
CNTNAP3BQ96NU0 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CNTNAP3BQ96NU0 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 Y_RNA.7-201ENST00000362352 102 ntBASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 RNU1-146P-201ENST00000364015 165 ntBASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 Y_RNA.217-201ENST00000364214 105 ntBASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 Y_RNA.238-201ENST00000364441 102 ntBASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 U3.10-201ENST00000364459 214 ntBASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 RNU4-56P-201ENST00000364700 142 ntBASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 SNORA20-201ENST00000384662 132 ntBASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 SNORA46.1-201ENST00000391069 153 ntBASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 RNU2-43P-201ENST00000410306 190 ntBASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 RNU5A-5P-201ENST00000411054 116 ntBASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 AL390729.2-201ENST00000416137 156 ntBASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 AL353621.1-201ENST00000418219 243 ntBASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 AC091390.3-201ENST00000426478 338 ntBASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 AC090774.1-201ENST00000435925 246 ntBASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 IFNA11P-201ENST00000446352 526 ntBASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 Y_RNA.641-201ENST00000459414 105 ntBASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 RPS26P21-201ENST00000475397 348 ntBASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 HMGB3P3-201ENST00000510526 400 ntBASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 RNU6-168P-201ENST00000516189 101 ntBASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 Y_RNA.706-201ENST00000516933 99 ntBASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 RN7SKP234-201ENST00000517173 224 ntBASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 IGKV1-32-201ENST00000519290 311 ntBASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 CYCSP29-201ENST00000533731 318 ntBASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 AC023575.1-201ENST00000580510 358 ntBASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 MIR4691-201ENST00000583764 85 ntBASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 AC005828.6-201ENST00000606610 232 ntBASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 MIR15A-201ENST00000607334 83 ntBASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 AC025574.2-201ENST00000615621 514 ntBASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 AC138965.3-201ENST00000623875 498 ntBASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CNTNAP3BQ96NU0 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CNTNAP3BQ96NU0 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CNTNAP3BQ96NU0 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CNTNAP3BQ96NU0 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CNTNAP3BQ96NU0 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CNTNAP3BQ96NU0 AC007685.1-201ENST00000329806 452 ntBASIC5.1□□□□□ -1.59
CNTNAP3BQ96NU0 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.1□□□□□ -1.59
CNTNAP3BQ96NU0 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms