Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 RNU6-1228P-201ENST00000391014 107 ntBASIC5.96□□□□□ -1.46
VARS2Q5ST30 RNU6-972P-201ENST00000391208 107 ntBASIC5.96□□□□□ -1.46
VARS2Q5ST30 CYB5AP4-201ENST00000396692 399 ntBASIC5.96□□□□□ -1.46
VARS2Q5ST30 AL158156.1-201ENST00000422509 473 ntBASIC5.96□□□□□ -1.46
VARS2Q5ST30 AC139453.2-201ENST00000487255 133 ntBASIC5.96□□□□□ -1.46
VARS2Q5ST30 RN7SL808P-201ENST00000496066 299 ntBASIC5.96□□□□□ -1.46
VARS2Q5ST30 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC5.96□□□□□ -1.46
VARS2Q5ST30 RN7SKP19-201ENST00000516016 252 ntBASIC5.96□□□□□ -1.46
VARS2Q5ST30 AC136628.3-201ENST00000521868 290 ntBASIC5.96□□□□□ -1.46
VARS2Q5ST30 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.96□□□□□ -1.46
VARS2Q5ST30 AL133481.2-203ENST00000607558 139 ntBASIC5.96□□□□□ -1.46
VARS2Q5ST30 MIR4496-201ENST00000635896 61 ntBASIC5.96□□□□□ -1.46
VARS2Q5ST30 PSMD5-AS1-215ENST00000640622 205 ntBASIC5.96□□□□□ -1.46
VARS2Q5ST30 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VARS2Q5ST30 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.96□□□□□ -1.46
VARS2Q5ST30 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VARS2Q5ST30 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
VARS2Q5ST30 AC125336.1-201ENST00000508893 2827 ntBASIC5.96□□□□□ -1.46
VARS2Q5ST30 AC018529.3-201ENST00000624212 2254 ntBASIC5.96□□□□□ -1.46
VARS2Q5ST30 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.96□□□□□ -1.46
VARS2Q5ST30 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
VARS2Q5ST30 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.95□□□□□ -1.46
VARS2Q5ST30 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
VARS2Q5ST30 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
VARS2Q5ST30 MIR494-201ENST00000349529 81 ntBASIC5.95□□□□□ -1.46
VARS2Q5ST30 Y_RNA.244-201ENST00000364484 109 ntBASIC5.95□□□□□ -1.46
VARS2Q5ST30 RNU6-729P-201ENST00000384399 107 ntBASIC5.95□□□□□ -1.46
VARS2Q5ST30 MT-TT-201ENST00000387460 66 ntBASIC5.95□□□□□ -1.46
VARS2Q5ST30 MIR526A2-201ENST00000390198 65 ntBASIC5.95□□□□□ -1.46
VARS2Q5ST30 AL512604.1-201ENST00000404812 257 ntBASIC5.95□□□□□ -1.46
VARS2Q5ST30 MLLT10P1-201ENST00000418346 262 ntBASIC5.95□□□□□ -1.46
VARS2Q5ST30 EIF1AXP1-201ENST00000419267 435 ntBASIC5.95□□□□□ -1.46
VARS2Q5ST30 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC5.95□□□□□ -1.46
VARS2Q5ST30 GSTM5P1-201ENST00000434751 660 ntBASIC5.95□□□□□ -1.46
VARS2Q5ST30 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.95□□□□□ -1.46
VARS2Q5ST30 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
VARS2Q5ST30 RNU6-58P-201ENST00000517143 103 ntBASIC5.95□□□□□ -1.46
VARS2Q5ST30 RNU6-840P-201ENST00000517275 65 ntBASIC5.95□□□□□ -1.46
VARS2Q5ST30 AC084851.1-201ENST00000529105 249 ntBASIC5.95□□□□□ -1.46
VARS2Q5ST30 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VARS2Q5ST30 RN7SL708P-201ENST00000580952 299 ntBASIC5.95□□□□□ -1.46
VARS2Q5ST30 AC123786.2-201ENST00000603459 275 ntBASIC5.95□□□□□ -1.46
VARS2Q5ST30 MIR6810-201ENST00000622701 70 ntBASIC5.95□□□□□ -1.46
VARS2Q5ST30 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
VARS2Q5ST30 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
VARS2Q5ST30 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
VARS2Q5ST30 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VARS2Q5ST30 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.94□□□□□ -1.46
VARS2Q5ST30 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VARS2Q5ST30 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
VARS2Q5ST30 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
VARS2Q5ST30 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
VARS2Q5ST30 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
VARS2Q5ST30 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
VARS2Q5ST30 AL355834.1-201ENST00000556602 3965 ntBASIC5.94□□□□□ -1.46
VARS2Q5ST30 AC007938.2-201ENST00000604666 2634 ntBASIC5.94□□□□□ -1.46
VARS2Q5ST30 RNU6-647P-201ENST00000364243 107 ntBASIC5.94□□□□□ -1.46
VARS2Q5ST30 MIR551A-201ENST00000385042 96 ntBASIC5.94□□□□□ -1.46
VARS2Q5ST30 RNU1-77P-201ENST00000390868 162 ntBASIC5.94□□□□□ -1.46
VARS2Q5ST30 RNU6-788P-201ENST00000390967 104 ntBASIC5.94□□□□□ -1.46
VARS2Q5ST30 AC005042.1-201ENST00000393397 800 ntBASIC5.94□□□□□ -1.46
VARS2Q5ST30 AL606845.1-201ENST00000404881 255 ntBASIC5.94□□□□□ -1.46
VARS2Q5ST30 AL355497.1-201ENST00000406262 551 ntBASIC5.94□□□□□ -1.46
VARS2Q5ST30 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.94□□□□□ -1.46
VARS2Q5ST30 RNU4-43P-201ENST00000410628 137 ntBASIC5.94□□□□□ -1.46
VARS2Q5ST30 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.94□□□□□ -1.46
VARS2Q5ST30 AL627311.1-201ENST00000431514 115 ntBASIC5.94□□□□□ -1.46
VARS2Q5ST30 AL135790.2-201ENST00000437701 267 ntBASIC5.94□□□□□ -1.46
VARS2Q5ST30 AC010095.1-201ENST00000443543 144 ntBASIC5.94□□□□□ -1.46
VARS2Q5ST30 RNU6-1218P-201ENST00000458990 108 ntBASIC5.94□□□□□ -1.46
VARS2Q5ST30 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC5.94□□□□□ -1.46
VARS2Q5ST30 RN7SKP66-201ENST00000516681 231 ntBASIC5.94□□□□□ -1.46
VARS2Q5ST30 RPL23AP53-201ENST00000521854 457 ntBASIC5.94□□□□□ -1.46
VARS2Q5ST30 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC5.94□□□□□ -1.46
VARS2Q5ST30 AC006199.1-201ENST00000548728 219 ntBASIC5.94□□□□□ -1.46
VARS2Q5ST30 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC5.94□□□□□ -1.46
VARS2Q5ST30 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.94□□□□□ -1.46
VARS2Q5ST30 AC069307.1-201ENST00000602820 447 ntBASIC5.94□□□□□ -1.46
VARS2Q5ST30 AC000068.2-201ENST00000608816 460 ntBASIC5.94□□□□□ -1.46
VARS2Q5ST30 AC009831.4-201ENST00000620744 325 ntBASIC5.94□□□□□ -1.46
VARS2Q5ST30 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
VARS2Q5ST30 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.94□□□□□ -1.46
VARS2Q5ST30 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
VARS2Q5ST30 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.94□□□□□ -1.46
VARS2Q5ST30 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
VARS2Q5ST30 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VARS2Q5ST30 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VARS2Q5ST30 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
VARS2Q5ST30 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.93□□□□□ -1.46
VARS2Q5ST30 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
VARS2Q5ST30 Y_RNA.287-201ENST00000364853 94 ntBASIC5.93□□□□□ -1.46
VARS2Q5ST30 RNU6-339P-201ENST00000384310 107 ntBASIC5.93□□□□□ -1.46
VARS2Q5ST30 MIR10A-201ENST00000385043 110 ntBASIC5.93□□□□□ -1.46
VARS2Q5ST30 AL645733.1-201ENST00000402250 217 ntBASIC5.93□□□□□ -1.46
VARS2Q5ST30 RN7SKP213-201ENST00000410746 298 ntBASIC5.93□□□□□ -1.46
VARS2Q5ST30 AC092447.6-201ENST00000414578 210 ntBASIC5.93□□□□□ -1.46
VARS2Q5ST30 AC009963.1-201ENST00000417265 157 ntBASIC5.93□□□□□ -1.46
VARS2Q5ST30 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC5.93□□□□□ -1.46
VARS2Q5ST30 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC5.93□□□□□ -1.46
VARS2Q5ST30 CYCSP6-201ENST00000434498 302 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms