Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.41□□□□□ -1.86
CLCN3P51790 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.41□□□□□ -1.86
CLCN3P51790 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.41□□□□□ -1.86
CLCN3P51790 AF038458.1-201ENST00000588406 262 ntBASIC3.41□□□□□ -1.86
CLCN3P51790 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.41□□□□□ -1.86
CLCN3P51790 SDR42E1P2-201ENST00000614861 481 ntBASIC3.41□□□□□ -1.86
CLCN3P51790 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
CLCN3P51790 AL157786.1-207ENST00000627771 695 ntBASIC3.41□□□□□ -1.86
CLCN3P51790 SEPT14P19-203ENST00000633205 211 ntBASIC3.41□□□□□ -1.86
CLCN3P51790 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.41□□□□□ -1.86
CLCN3P51790 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLCN3P51790 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.41□□□□□ -1.86
CLCN3P51790 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLCN3P51790 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.41□□□□□ -1.86
CLCN3P51790 AC008568.2-201ENST00000623862 2313 ntBASIC3.41□□□□□ -1.86
CLCN3P51790 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CLCN3P51790 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CLCN3P51790 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.4□□□□□ -1.86
CLCN3P51790 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
CLCN3P51790 U3.11-201ENST00000364476 212 ntBASIC3.4□□□□□ -1.87
CLCN3P51790 SNORA71.1-201ENST00000364523 117 ntBASIC3.4□□□□□ -1.87
CLCN3P51790 RNY4P16-201ENST00000364768 94 ntBASIC3.4□□□□□ -1.87
CLCN3P51790 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.4□□□□□ -1.87
CLCN3P51790 MIR634-201ENST00000385208 97 ntBASIC3.4□□□□□ -1.87
CLCN3P51790 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.4□□□□□ -1.87
CLCN3P51790 CIR1P3-201ENST00000405137 479 ntBASIC3.4□□□□□ -1.87
CLCN3P51790 Y_RNA.604-201ENST00000410574 102 ntBASIC3.4□□□□□ -1.87
CLCN3P51790 RN7SKP220-201ENST00000410611 288 ntBASIC3.4□□□□□ -1.87
CLCN3P51790 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.4□□□□□ -1.87
CLCN3P51790 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.4□□□□□ -1.87
CLCN3P51790 AC119618.1-201ENST00000434191 222 ntBASIC3.4□□□□□ -1.87
CLCN3P51790 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
CLCN3P51790 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.4□□□□□ -1.87
CLCN3P51790 AL136380.1-201ENST00000447970 162 ntBASIC3.4□□□□□ -1.87
CLCN3P51790 AC140076.1-201ENST00000449897 361 ntBASIC3.4□□□□□ -1.87
CLCN3P51790 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.4□□□□□ -1.87
CLCN3P51790 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.4□□□□□ -1.87
CLCN3P51790 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.4□□□□□ -1.87
CLCN3P51790 AL136097.1-201ENST00000456945 913 ntBASIC3.4□□□□□ -1.87
CLCN3P51790 CEACAMP4-201ENST00000457676 421 ntBASIC3.4□□□□□ -1.87
CLCN3P51790 AC010401.1-201ENST00000463867 348 ntBASIC3.4□□□□□ -1.87
CLCN3P51790 MTCO3P38-201ENST00000468910 766 ntBASIC3.4□□□□□ -1.87
CLCN3P51790 SNRPGP3-201ENST00000469405 227 ntBASIC3.4□□□□□ -1.87
CLCN3P51790 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.4□□□□□ -1.87
CLCN3P51790 MTAPP1-201ENST00000489154 819 ntBASIC3.4□□□□□ -1.87
CLCN3P51790 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.4□□□□□ -1.87
CLCN3P51790 HMGB1P29-201ENST00000505659 499 ntBASIC3.4□□□□□ -1.87
CLCN3P51790 RNU6-840P-201ENST00000517275 65 ntBASIC3.4□□□□□ -1.87
CLCN3P51790 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.4□□□□□ -1.87
CLCN3P51790 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.4□□□□□ -1.87
CLCN3P51790 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.4□□□□□ -1.87
CLCN3P51790 AC092325.1-201ENST00000566449 554 ntBASIC3.4□□□□□ -1.87
CLCN3P51790 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.4□□□□□ -1.87
CLCN3P51790 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.4□□□□□ -1.87
CLCN3P51790 AP002360.4-201ENST00000606980 481 ntBASIC3.4□□□□□ -1.87
CLCN3P51790 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
CLCN3P51790 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.4□□□□□ -1.87
CLCN3P51790 AC072046.2-201ENST00000618366 268 ntBASIC3.4□□□□□ -1.87
CLCN3P51790 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.4□□□□□ -1.87
CLCN3P51790 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.4□□□□□ -1.87
CLCN3P51790 AC092628.2-201ENST00000622492 339 ntBASIC3.4□□□□□ -1.87
CLCN3P51790 CR381653.2-201ENST00000624041 768 ntBASIC3.4□□□□□ -1.87
CLCN3P51790 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CLCN3P51790 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
CLCN3P51790 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
CLCN3P51790 AF127577.6-201ENST00000623352 2191 ntBASIC3.39□□□□□ -1.87
CLCN3P51790 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.39□□□□□ -1.87
CLCN3P51790 AL365361.1-201ENST00000566942 3481 ntBASIC3.39□□□□□ -1.87
CLCN3P51790 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CLCN3P51790 MIR22-201ENST00000362190 85 ntBASIC3.39□□□□□ -1.87
CLCN3P51790 RNU6-511P-201ENST00000363496 107 ntBASIC3.39□□□□□ -1.87
CLCN3P51790 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.39□□□□□ -1.87
CLCN3P51790 MIR514A1-201ENST00000385133 98 ntBASIC3.39□□□□□ -1.87
CLCN3P51790 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CLCN3P51790 AL359634.1-202ENST00000404721 284 ntBASIC3.39□□□□□ -1.87
CLCN3P51790 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.39□□□□□ -1.87
CLCN3P51790 COTL1P1-201ENST00000422309 375 ntBASIC3.39□□□□□ -1.87
CLCN3P51790 RPL31P12-201ENST00000422587 358 ntBASIC3.39□□□□□ -1.87
CLCN3P51790 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.39□□□□□ -1.87
CLCN3P51790 RPL7L1P10-201ENST00000427790 463 ntBASIC3.39□□□□□ -1.87
CLCN3P51790 AC000111.3-201ENST00000433478 193 ntBASIC3.39□□□□□ -1.87
CLCN3P51790 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.39□□□□□ -1.87
CLCN3P51790 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.39□□□□□ -1.87
CLCN3P51790 HMGB3P8-201ENST00000449709 577 ntBASIC3.39□□□□□ -1.87
CLCN3P51790 PSPHP1-201ENST00000450062 261 ntBASIC3.39□□□□□ -1.87
CLCN3P51790 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.39□□□□□ -1.87
CLCN3P51790 AL359385.1-201ENST00000456509 365 ntBASIC3.39□□□□□ -1.87
CLCN3P51790 AC013267.1-201ENST00000458227 267 ntBASIC3.39□□□□□ -1.87
CLCN3P51790 SNORD97-201ENST00000459187 142 ntBASIC3.39□□□□□ -1.87
CLCN3P51790 RPS20P20-201ENST00000460498 340 ntBASIC3.39□□□□□ -1.87
CLCN3P51790 RPS4XP22-201ENST00000480755 780 ntBASIC3.39□□□□□ -1.87
CLCN3P51790 AC019235.1-201ENST00000503847 207 ntBASIC3.39□□□□□ -1.87
CLCN3P51790 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.39□□□□□ -1.87
CLCN3P51790 RNU2-10P-201ENST00000516375 211 ntBASIC3.39□□□□□ -1.87
CLCN3P51790 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.39□□□□□ -1.87
CLCN3P51790 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.39□□□□□ -1.87
CLCN3P51790 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.39□□□□□ -1.87
CLCN3P51790 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CLCN3P51790 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.39□□□□□ -1.87
CLCN3P51790 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms