Protein–RNA interactions for Protein: P49760

CLK2, Dual specificity protein kinase CLK2, humanhuman

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2P49760 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLK2P49760 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLK2P49760 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CLK2P49760 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLK2P49760 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLK2P49760 RNU6-774P-201ENST00000363238 107 ntBASIC5.6□□□□□ -1.51
CLK2P49760 RNU6-378P-201ENST00000384324 107 ntBASIC5.6□□□□□ -1.51
CLK2P49760 AC007738.1-201ENST00000413892 348 ntBASIC5.6□□□□□ -1.51
CLK2P49760 AL358453.1-201ENST00000422522 250 ntBASIC5.6□□□□□ -1.51
CLK2P49760 AL645608.4-201ENST00000423619 154 ntBASIC5.6□□□□□ -1.51
CLK2P49760 RPL35AP21-201ENST00000437667 333 ntBASIC5.6□□□□□ -1.51
CLK2P49760 AURKAPS2-201ENST00000454983 333 ntBASIC5.6□□□□□ -1.51
CLK2P49760 Y_RNA.644-201ENST00000459006 113 ntBASIC5.6□□□□□ -1.51
CLK2P49760 snoU109.2-201ENST00000459316 135 ntBASIC5.6□□□□□ -1.51
CLK2P49760 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC5.6□□□□□ -1.51
CLK2P49760 Y_RNA.674-201ENST00000516362 113 ntBASIC5.6□□□□□ -1.51
CLK2P49760 RN7SKP272-201ENST00000516988 232 ntBASIC5.6□□□□□ -1.51
CLK2P49760 AC023824.2-201ENST00000566185 400 ntBASIC5.6□□□□□ -1.51
CLK2P49760 MIR4659A-201ENST00000580269 81 ntBASIC5.6□□□□□ -1.51
CLK2P49760 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.6□□□□□ -1.51
CLK2P49760 AL049539.1-201ENST00000611964 459 ntBASIC5.6□□□□□ -1.51
CLK2P49760 MIR6730-201ENST00000622213 67 ntBASIC5.6□□□□□ -1.51
CLK2P49760 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CLK2P49760 SMG1P4-204ENST00000523028 4131 ntBASIC5.6□□□□□ -1.51
CLK2P49760 AC007785.2-201ENST00000598627 1916 ntBASIC5.6□□□□□ -1.51
CLK2P49760 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLK2P49760 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLK2P49760 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLK2P49760 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.59□□□□□ -1.51
CLK2P49760 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLK2P49760 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLK2P49760 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLK2P49760 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.59□□□□□ -1.51
CLK2P49760 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CLK2P49760 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLK2P49760 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.59□□□□□ -1.51
CLK2P49760 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLK2P49760 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
CLK2P49760 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CLK2P49760 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.59□□□□□ -1.51
CLK2P49760 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLK2P49760 RNU6-1301P-201ENST00000362724 104 ntBASIC5.59□□□□□ -1.51
CLK2P49760 RNU6-662P-201ENST00000384253 104 ntBASIC5.59□□□□□ -1.51
CLK2P49760 Y_RNA.464-201ENST00000384282 110 ntBASIC5.59□□□□□ -1.51
CLK2P49760 RNU6-72P-201ENST00000384285 79 ntBASIC5.59□□□□□ -1.51
CLK2P49760 RNU2-20P-201ENST00000410425 191 ntBASIC5.59□□□□□ -1.51
CLK2P49760 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC5.59□□□□□ -1.51
CLK2P49760 RPS27P18-201ENST00000431701 247 ntBASIC5.59□□□□□ -1.51
CLK2P49760 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.59□□□□□ -1.51
CLK2P49760 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.59□□□□□ -1.51
CLK2P49760 BTF3P6-201ENST00000448054 499 ntBASIC5.59□□□□□ -1.51
CLK2P49760 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.59□□□□□ -1.51
CLK2P49760 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.59□□□□□ -1.51
CLK2P49760 snoU13.4-201ENST00000458916 104 ntBASIC5.59□□□□□ -1.51
CLK2P49760 snoU13.24-201ENST00000458998 104 ntBASIC5.59□□□□□ -1.51
CLK2P49760 HMGB1P22-201ENST00000505315 124 ntBASIC5.59□□□□□ -1.51
CLK2P49760 MIR3934-201ENST00000579806 107 ntBASIC5.59□□□□□ -1.51
CLK2P49760 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.59□□□□□ -1.51
CLK2P49760 MIR4737-201ENST00000583979 81 ntBASIC5.59□□□□□ -1.51
CLK2P49760 AC099506.2-201ENST00000623074 221 ntBASIC5.59□□□□□ -1.51
CLK2P49760 PSMD5-AS1-215ENST00000640622 205 ntBASIC5.59□□□□□ -1.51
CLK2P49760 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CLK2P49760 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CLK2P49760 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CLK2P49760 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLK2P49760 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLK2P49760 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CLK2P49760 AC009541.1-201ENST00000438279 2662 ntBASIC5.59□□□□□ -1.52
CLK2P49760 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLK2P49760 AL731532.2-201ENST00000623542 1953 ntBASIC5.58□□□□□ -1.52
CLK2P49760 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLK2P49760 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.58□□□□□ -1.52
CLK2P49760 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.58□□□□□ -1.52
CLK2P49760 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
CLK2P49760 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLK2P49760 RNU6-545P-201ENST00000362681 104 ntBASIC5.58□□□□□ -1.52
CLK2P49760 RNU6-290P-201ENST00000365212 101 ntBASIC5.58□□□□□ -1.52
CLK2P49760 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLK2P49760 RNU6-937P-201ENST00000384325 106 ntBASIC5.58□□□□□ -1.52
CLK2P49760 RNA5SP187-201ENST00000384400 119 ntBASIC5.58□□□□□ -1.52
CLK2P49760 SNORA11B-201ENST00000408175 129 ntBASIC5.58□□□□□ -1.52
CLK2P49760 AC104333.2-201ENST00000422630 192 ntBASIC5.58□□□□□ -1.52
CLK2P49760 AC007389.2-201ENST00000434630 306 ntBASIC5.58□□□□□ -1.52
CLK2P49760 OR4C10P-201ENST00000434991 931 ntBASIC5.58□□□□□ -1.52
CLK2P49760 Z82188.1-201ENST00000436709 154 ntBASIC5.58□□□□□ -1.52
CLK2P49760 RNU6-496P-201ENST00000516145 99 ntBASIC5.58□□□□□ -1.52
CLK2P49760 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.58□□□□□ -1.52
CLK2P49760 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.58□□□□□ -1.52
CLK2P49760 TRAV28-201ENST00000557548 323 ntBASIC5.58□□□□□ -1.52
CLK2P49760 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.58□□□□□ -1.52
CLK2P49760 AC019206.1-201ENST00000621938 425 ntBASIC5.58□□□□□ -1.52
CLK2P49760 AC091953.3-201ENST00000623220 236 ntBASIC5.58□□□□□ -1.52
CLK2P49760 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLK2P49760 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
CLK2P49760 AC063976.2-201ENST00000425667 3556 ntBASIC5.58□□□□□ -1.52
CLK2P49760 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLK2P49760 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
CLK2P49760 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLK2P49760 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
CLK2P49760 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms