Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXP3Q9BZS1 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
FOXP3Q9BZS1 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.59□□□□□ -1.67
FOXP3Q9BZS1 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.59□□□□□ -1.67
FOXP3Q9BZS1 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
FOXP3Q9BZS1 RNA5SP447-201ENST00000363749 119 ntBASIC4.59□□□□□ -1.67
FOXP3Q9BZS1 SNORA23-201ENST00000365128 182 ntBASIC4.59□□□□□ -1.67
FOXP3Q9BZS1 RHOT1P2-201ENST00000366423 333 ntBASIC4.59□□□□□ -1.67
FOXP3Q9BZS1 RNU6-26P-201ENST00000383985 107 ntBASIC4.59□□□□□ -1.67
FOXP3Q9BZS1 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
FOXP3Q9BZS1 AL139039.1-201ENST00000401900 692 ntBASIC4.59□□□□□ -1.67
FOXP3Q9BZS1 AC080125.1-201ENST00000414888 684 ntBASIC4.59□□□□□ -1.67
FOXP3Q9BZS1 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.59□□□□□ -1.67
FOXP3Q9BZS1 AL137014.1-201ENST00000420490 1226 ntBASIC4.59□□□□□ -1.67
FOXP3Q9BZS1 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.59□□□□□ -1.67
FOXP3Q9BZS1 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC4.59□□□□□ -1.67
FOXP3Q9BZS1 Z98949.2-201ENST00000440996 144 ntBASIC4.59□□□□□ -1.67
FOXP3Q9BZS1 NOTCH2P1-201ENST00000443481 624 ntBASIC4.59□□□□□ -1.67
FOXP3Q9BZS1 AC008264.1-201ENST00000447612 367 ntBASIC4.59□□□□□ -1.67
FOXP3Q9BZS1 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.59□□□□□ -1.67
FOXP3Q9BZS1 AC022493.2-201ENST00000506122 481 ntBASIC4.59□□□□□ -1.67
FOXP3Q9BZS1 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.59□□□□□ -1.67
FOXP3Q9BZS1 AC096745.1-201ENST00000509945 370 ntBASIC4.59□□□□□ -1.67
FOXP3Q9BZS1 SCARNA16.2-201ENST00000516520 172 ntBASIC4.59□□□□□ -1.67
FOXP3Q9BZS1 SNORD116.3-201ENST00000517176 78 ntBASIC4.59□□□□□ -1.67
FOXP3Q9BZS1 IFITM8P-201ENST00000522529 394 ntBASIC4.59□□□□□ -1.67
FOXP3Q9BZS1 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.59□□□□□ -1.67
FOXP3Q9BZS1 AC011494.1-201ENST00000596454 237 ntBASIC4.59□□□□□ -1.67
FOXP3Q9BZS1 IGHV3-29-201ENST00000604817 344 ntBASIC4.59□□□□□ -1.67
FOXP3Q9BZS1 AL161423.1-201ENST00000613700 262 ntBASIC4.59□□□□□ -1.67
FOXP3Q9BZS1 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.59□□□□□ -1.67
FOXP3Q9BZS1 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.59□□□□□ -1.67
FOXP3Q9BZS1 CDC27P3-201ENST00000635418 1910 ntBASIC4.59□□□□□ -1.67
FOXP3Q9BZS1 MIR6830-201ENST00000636015 70 ntBASIC4.59□□□□□ -1.67
FOXP3Q9BZS1 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
FOXP3Q9BZS1 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
FOXP3Q9BZS1 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.68
FOXP3Q9BZS1 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 MFSD8-242ENST00000641690 4199 ntBASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 RNU6-1155P-201ENST00000363554 107 ntBASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 SNORA71.2-201ENST00000364941 134 ntBASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 SNORA63.7-201ENST00000365579 123 ntBASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 RNU6-214P-201ENST00000384130 107 ntBASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 RNU6-14P-201ENST00000384630 106 ntBASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 Y_RNA.556-201ENST00000384677 113 ntBASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 MIR129-1-201ENST00000384972 72 ntBASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 AC092809.3-201ENST00000415453 231 ntBASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 DPH3P2-201ENST00000422618 250 ntBASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 AL732292.1-201ENST00000426692 226 ntBASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 USP9YP30-201ENST00000430729 455 ntBASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 AC069285.2-201ENST00000440210 275 ntBASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 AC012671.1-201ENST00000451912 203 ntBASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 RPL21P103-201ENST00000479921 488 ntBASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 VN1R105P-201ENST00000486595 910 ntBASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 VWA8P1-201ENST00000510889 176 ntBASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 SNORD116-26-201ENST00000516006 96 ntBASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 RNU6-1095P-201ENST00000516148 108 ntBASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 RNU6-390P-201ENST00000516259 103 ntBASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 RNU6-677P-201ENST00000516914 101 ntBASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 RN7SKP60-201ENST00000516985 239 ntBASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 Y_RNA.721-201ENST00000517207 102 ntBASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 TOMM20P2-201ENST00000540082 421 ntBASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 AL590392.1-201ENST00000604960 446 ntBASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 AC018889.1-201ENST00000605372 397 ntBASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.58□□□□□ -1.68
FOXP3Q9BZS1 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
FOXP3Q9BZS1 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
FOXP3Q9BZS1 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
FOXP3Q9BZS1 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.57□□□□□ -1.68
FOXP3Q9BZS1 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
FOXP3Q9BZS1 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
FOXP3Q9BZS1 RNU6-306P-201ENST00000384617 107 ntBASIC4.57□□□□□ -1.68
FOXP3Q9BZS1 RPS4XP7-201ENST00000406274 780 ntBASIC4.57□□□□□ -1.68
FOXP3Q9BZS1 AC243428.1-201ENST00000421099 264 ntBASIC4.57□□□□□ -1.68
FOXP3Q9BZS1 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.57□□□□□ -1.68
FOXP3Q9BZS1 RPS27AP12-201ENST00000429552 465 ntBASIC4.57□□□□□ -1.68
FOXP3Q9BZS1 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
FOXP3Q9BZS1 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.57□□□□□ -1.68
FOXP3Q9BZS1 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.57□□□□□ -1.68
FOXP3Q9BZS1 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.57□□□□□ -1.68
FOXP3Q9BZS1 ABCF2P2-201ENST00000450549 296 ntBASIC4.57□□□□□ -1.68
FOXP3Q9BZS1 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms