Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PHOX2BQ99453 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.64□□□□□ -1.51
PHOX2BQ99453 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC5.64□□□□□ -1.51
PHOX2BQ99453 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
PHOX2BQ99453 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC5.64□□□□□ -1.51
PHOX2BQ99453 RNA5SP197-201ENST00000363357 119 ntBASIC5.64□□□□□ -1.51
PHOX2BQ99453 RNU6-1175P-201ENST00000365200 107 ntBASIC5.64□□□□□ -1.51
PHOX2BQ99453 SNORA67-201ENST00000384423 137 ntBASIC5.64□□□□□ -1.51
PHOX2BQ99453 RNU6-959P-201ENST00000384671 107 ntBASIC5.64□□□□□ -1.51
PHOX2BQ99453 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
PHOX2BQ99453 RNA5SP44-201ENST00000410446 133 ntBASIC5.64□□□□□ -1.51
PHOX2BQ99453 RNA5SP31-201ENST00000411144 127 ntBASIC5.64□□□□□ -1.51
PHOX2BQ99453 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.64□□□□□ -1.51
PHOX2BQ99453 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.64□□□□□ -1.51
PHOX2BQ99453 RN7SKP21-201ENST00000516503 220 ntBASIC5.64□□□□□ -1.51
PHOX2BQ99453 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC5.64□□□□□ -1.51
PHOX2BQ99453 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.64□□□□□ -1.51
PHOX2BQ99453 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC5.64□□□□□ -1.51
PHOX2BQ99453 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.64□□□□□ -1.51
PHOX2BQ99453 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.64□□□□□ -1.51
PHOX2BQ99453 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.64□□□□□ -1.51
PHOX2BQ99453 AC068724.3-201ENST00000625906 87 ntBASIC5.64□□□□□ -1.51
PHOX2BQ99453 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
PHOX2BQ99453 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PHOX2BQ99453 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.64□□□□□ -1.51
PHOX2BQ99453 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.64□□□□□ -1.51
PHOX2BQ99453 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PHOX2BQ99453 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PHOX2BQ99453 AL353796.1-201ENST00000561542 3241 ntBASIC5.64□□□□□ -1.51
PHOX2BQ99453 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PHOX2BQ99453 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.64□□□□□ -1.51
PHOX2BQ99453 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PHOX2BQ99453 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PHOX2BQ99453 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PHOX2BQ99453 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
PHOX2BQ99453 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
PHOX2BQ99453 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PHOX2BQ99453 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
PHOX2BQ99453 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.63□□□□□ -1.51
PHOX2BQ99453 RNA5SP361-201ENST00000362686 118 ntBASIC5.63□□□□□ -1.51
PHOX2BQ99453 Y_RNA.308-201ENST00000365043 101 ntBASIC5.63□□□□□ -1.51
PHOX2BQ99453 RNU6-281P-201ENST00000384212 103 ntBASIC5.63□□□□□ -1.51
PHOX2BQ99453 SNORA68.2-201ENST00000391263 128 ntBASIC5.63□□□□□ -1.51
PHOX2BQ99453 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PHOX2BQ99453 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PHOX2BQ99453 Y_RNA.597-201ENST00000410463 100 ntBASIC5.63□□□□□ -1.51
PHOX2BQ99453 GSTM5P1-201ENST00000434751 660 ntBASIC5.63□□□□□ -1.51
PHOX2BQ99453 SNRPEP9-201ENST00000436794 238 ntBASIC5.63□□□□□ -1.51
PHOX2BQ99453 UQCRBP2-201ENST00000447827 297 ntBASIC5.63□□□□□ -1.51
PHOX2BQ99453 AC006427.1-201ENST00000514359 712 ntBASIC5.63□□□□□ -1.51
PHOX2BQ99453 RNU6-1219P-201ENST00000516143 112 ntBASIC5.63□□□□□ -1.51
PHOX2BQ99453 RN7SKP276-201ENST00000516242 268 ntBASIC5.63□□□□□ -1.51
PHOX2BQ99453 CYCSP23-201ENST00000519781 313 ntBASIC5.63□□□□□ -1.51
PHOX2BQ99453 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.63□□□□□ -1.51
PHOX2BQ99453 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.63□□□□□ -1.51
PHOX2BQ99453 AC092490.3-201ENST00000545370 572 ntBASIC5.63□□□□□ -1.51
PHOX2BQ99453 ZNF192P1-203ENST00000565888 810 ntBASIC5.63□□□□□ -1.51
PHOX2BQ99453 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.63□□□□□ -1.51
PHOX2BQ99453 AC090132.2-201ENST00000615881 347 ntBASIC5.63□□□□□ -1.51
PHOX2BQ99453 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
PHOX2BQ99453 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
PHOX2BQ99453 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PHOX2BQ99453 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PHOX2BQ99453 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PHOX2BQ99453 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
PHOX2BQ99453 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PHOX2BQ99453 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC5.62□□□□□ -1.51
PHOX2BQ99453 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PHOX2BQ99453 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PHOX2BQ99453 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
PHOX2BQ99453 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
PHOX2BQ99453 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
PHOX2BQ99453 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PHOX2BQ99453 RNA5SP453-201ENST00000362503 119 ntBASIC5.62□□□□□ -1.51
PHOX2BQ99453 RNU6-335P-201ENST00000364563 113 ntBASIC5.62□□□□□ -1.51
PHOX2BQ99453 Y_RNA.331-201ENST00000365267 102 ntBASIC5.62□□□□□ -1.51
PHOX2BQ99453 Y_RNA.446-201ENST00000384178 104 ntBASIC5.62□□□□□ -1.51
PHOX2BQ99453 RNU6-1181P-201ENST00000384191 106 ntBASIC5.62□□□□□ -1.51
PHOX2BQ99453 MIR10B-201ENST00000385011 110 ntBASIC5.62□□□□□ -1.51
PHOX2BQ99453 RPL18P10-201ENST00000425606 538 ntBASIC5.62□□□□□ -1.51
PHOX2BQ99453 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.62□□□□□ -1.51
PHOX2BQ99453 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.62□□□□□ -1.51
PHOX2BQ99453 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC5.62□□□□□ -1.51
PHOX2BQ99453 SSXP4-201ENST00000451349 245 ntBASIC5.62□□□□□ -1.51
PHOX2BQ99453 AF186996.7-201ENST00000492781 209 ntBASIC5.62□□□□□ -1.51
PHOX2BQ99453 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.62□□□□□ -1.51
PHOX2BQ99453 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC5.62□□□□□ -1.51
PHOX2BQ99453 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.62□□□□□ -1.51
PHOX2BQ99453 LINC00933-203ENST00000559812 219 ntBASIC5.62□□□□□ -1.51
PHOX2BQ99453 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.62□□□□□ -1.51
PHOX2BQ99453 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PHOX2BQ99453 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.62□□□□□ -1.51
PHOX2BQ99453 MIR5695-201ENST00000579717 85 ntBASIC5.62□□□□□ -1.51
PHOX2BQ99453 AC005176.2-201ENST00000596933 147 ntBASIC5.62□□□□□ -1.51
PHOX2BQ99453 AC012616.1-201ENST00000600294 197 ntBASIC5.62□□□□□ -1.51
PHOX2BQ99453 AC091895.1-201ENST00000624494 256 ntBASIC5.62□□□□□ -1.51
PHOX2BQ99453 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PHOX2BQ99453 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.62□□□□□ -1.51
PHOX2BQ99453 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PHOX2BQ99453 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms