Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1G3Q9Y6M4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.66■□□□□ 0.58
CSNK1G3Q9Y6M4 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1G3Q9Y6M4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1G3Q9Y6M4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1G3Q9Y6M4 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CSNK1G3Q9Y6M4 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1G3Q9Y6M4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.66■□□□□ 0.58
CSNK1G3Q9Y6M4 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1G3Q9Y6M4 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.66■□□□□ 0.58
CSNK1G3Q9Y6M4 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1G3Q9Y6M4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.66■□□□□ 0.58
CSNK1G3Q9Y6M4 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
CSNK1G3Q9Y6M4 AL023973.1-201ENST00000624619 620 ntBASIC18.66■□□□□ 0.58
CSNK1G3Q9Y6M4 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.66■□□□□ 0.58
CSNK1G3Q9Y6M4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.66■□□□□ 0.58
CSNK1G3Q9Y6M4 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.66■□□□□ 0.58
CSNK1G3Q9Y6M4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.66■□□□□ 0.58
CSNK1G3Q9Y6M4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1G3Q9Y6M4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1G3Q9Y6M4 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CSNK1G3Q9Y6M4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.65■□□□□ 0.58
CSNK1G3Q9Y6M4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CSNK1G3Q9Y6M4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1G3Q9Y6M4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
CSNK1G3Q9Y6M4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.65■□□□□ 0.58
CSNK1G3Q9Y6M4 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1G3Q9Y6M4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.65■□□□□ 0.58
CSNK1G3Q9Y6M4 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.65■□□□□ 0.58
CSNK1G3Q9Y6M4 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.65■□□□□ 0.58
CSNK1G3Q9Y6M4 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.65■□□□□ 0.58
CSNK1G3Q9Y6M4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.65■□□□□ 0.58
CSNK1G3Q9Y6M4 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CSNK1G3Q9Y6M4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.65■□□□□ 0.58
CSNK1G3Q9Y6M4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CSNK1G3Q9Y6M4 AC112907.3-201ENST00000577781 2400 ntBASIC18.65■□□□□ 0.58
CSNK1G3Q9Y6M4 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1G3Q9Y6M4 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
CSNK1G3Q9Y6M4 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.65■□□□□ 0.58
CSNK1G3Q9Y6M4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1G3Q9Y6M4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1G3Q9Y6M4 AC104417.2-201ENST00000562989 1793 ntBASIC18.65■□□□□ 0.58
CSNK1G3Q9Y6M4 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1G3Q9Y6M4 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CSNK1G3Q9Y6M4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.65■□□□□ 0.58
CSNK1G3Q9Y6M4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CSNK1G3Q9Y6M4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CSNK1G3Q9Y6M4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.64■□□□□ 0.57
CSNK1G3Q9Y6M4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CSNK1G3Q9Y6M4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CSNK1G3Q9Y6M4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CSNK1G3Q9Y6M4 TSPY21P-201ENST00000433481 731 ntBASIC18.64■□□□□ 0.57
CSNK1G3Q9Y6M4 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSNK1G3Q9Y6M4 AL671277.2-201ENST00000458060 996 ntBASIC18.64■□□□□ 0.57
CSNK1G3Q9Y6M4 FAM86EP-206ENST00000510506 987 ntBASIC18.64■□□□□ 0.57
CSNK1G3Q9Y6M4 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
CSNK1G3Q9Y6M4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.64■□□□□ 0.57
CSNK1G3Q9Y6M4 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.64■□□□□ 0.57
CSNK1G3Q9Y6M4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.64■□□□□ 0.57
CSNK1G3Q9Y6M4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
CSNK1G3Q9Y6M4 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSNK1G3Q9Y6M4 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSNK1G3Q9Y6M4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CSNK1G3Q9Y6M4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSNK1G3Q9Y6M4 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSNK1G3Q9Y6M4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSNK1G3Q9Y6M4 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.64■□□□□ 0.57
CSNK1G3Q9Y6M4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSNK1G3Q9Y6M4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSNK1G3Q9Y6M4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSNK1G3Q9Y6M4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CSNK1G3Q9Y6M4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.63■□□□□ 0.57
CSNK1G3Q9Y6M4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSNK1G3Q9Y6M4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.63■□□□□ 0.57
CSNK1G3Q9Y6M4 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSNK1G3Q9Y6M4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSNK1G3Q9Y6M4 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSNK1G3Q9Y6M4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSNK1G3Q9Y6M4 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CSNK1G3Q9Y6M4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.63■□□□□ 0.57
CSNK1G3Q9Y6M4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.63■□□□□ 0.57
CSNK1G3Q9Y6M4 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSNK1G3Q9Y6M4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.63■□□□□ 0.57
CSNK1G3Q9Y6M4 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.63■□□□□ 0.57
CSNK1G3Q9Y6M4 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.63■□□□□ 0.57
CSNK1G3Q9Y6M4 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.63■□□□□ 0.57
CSNK1G3Q9Y6M4 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSNK1G3Q9Y6M4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.63■□□□□ 0.57
CSNK1G3Q9Y6M4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CSNK1G3Q9Y6M4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSNK1G3Q9Y6M4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSNK1G3Q9Y6M4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CSNK1G3Q9Y6M4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.63■□□□□ 0.57
CSNK1G3Q9Y6M4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSNK1G3Q9Y6M4 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSNK1G3Q9Y6M4 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
CSNK1G3Q9Y6M4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.63■□□□□ 0.57
CSNK1G3Q9Y6M4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.63■□□□□ 0.57
CSNK1G3Q9Y6M4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CSNK1G3Q9Y6M4 ZNF815P-204ENST00000434898 1737 ntBASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms