Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNX9Q9Y5X1 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SNX9Q9Y5X1 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNX9Q9Y5X1 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNX9Q9Y5X1 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNX9Q9Y5X1 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNX9Q9Y5X1 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNX9Q9Y5X1 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.42■□□□□ 0.86
SNX9Q9Y5X1 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
SNX9Q9Y5X1 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNX9Q9Y5X1 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.42■□□□□ 0.86
SNX9Q9Y5X1 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNX9Q9Y5X1 SLC25A1P2-201ENST00000430693 912 ntBASIC20.42■□□□□ 0.86
SNX9Q9Y5X1 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNX9Q9Y5X1 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.42■□□□□ 0.86
SNX9Q9Y5X1 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.42■□□□□ 0.86
SNX9Q9Y5X1 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SNX9Q9Y5X1 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.42■□□□□ 0.86
SNX9Q9Y5X1 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNX9Q9Y5X1 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNX9Q9Y5X1 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.42■□□□□ 0.86
SNX9Q9Y5X1 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.42■□□□□ 0.86
SNX9Q9Y5X1 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNX9Q9Y5X1 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.42■□□□□ 0.86
SNX9Q9Y5X1 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNX9Q9Y5X1 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNX9Q9Y5X1 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNX9Q9Y5X1 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNX9Q9Y5X1 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SNX9Q9Y5X1 CCR12P-201ENST00000446203 998 ntBASIC20.41■□□□□ 0.86
SNX9Q9Y5X1 ECEL1P2-202ENST00000465689 757 ntBASIC20.41■□□□□ 0.86
SNX9Q9Y5X1 AC128688.1-201ENST00000487626 519 ntBASIC20.41■□□□□ 0.86
SNX9Q9Y5X1 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.41■□□□□ 0.86
SNX9Q9Y5X1 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNX9Q9Y5X1 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.41■□□□□ 0.86
SNX9Q9Y5X1 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.41■□□□□ 0.86
SNX9Q9Y5X1 AC116562.4-202ENST00000641738 218 ntBASIC20.41■□□□□ 0.86
SNX9Q9Y5X1 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNX9Q9Y5X1 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNX9Q9Y5X1 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNX9Q9Y5X1 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SNX9Q9Y5X1 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.41■□□□□ 0.86
SNX9Q9Y5X1 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.41■□□□□ 0.86
SNX9Q9Y5X1 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
SNX9Q9Y5X1 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNX9Q9Y5X1 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SNX9Q9Y5X1 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNX9Q9Y5X1 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNX9Q9Y5X1 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNX9Q9Y5X1 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNX9Q9Y5X1 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.4■□□□□ 0.86
SNX9Q9Y5X1 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SNX9Q9Y5X1 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.4■□□□□ 0.86
SNX9Q9Y5X1 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.4■□□□□ 0.86
SNX9Q9Y5X1 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNX9Q9Y5X1 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNX9Q9Y5X1 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.4■□□□□ 0.86
SNX9Q9Y5X1 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SNX9Q9Y5X1 CA15P1-201ENST00000481698 905 ntBASIC20.4■□□□□ 0.86
SNX9Q9Y5X1 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SNX9Q9Y5X1 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNX9Q9Y5X1 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.4■□□□□ 0.86
SNX9Q9Y5X1 AC116562.4-201ENST00000641316 2276 ntBASIC20.39■□□□□ 0.86
SNX9Q9Y5X1 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SNX9Q9Y5X1 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SNX9Q9Y5X1 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
SNX9Q9Y5X1 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SNX9Q9Y5X1 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
SNX9Q9Y5X1 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNX9Q9Y5X1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNX9Q9Y5X1 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SNX9Q9Y5X1 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.39■□□□□ 0.85
SNX9Q9Y5X1 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNX9Q9Y5X1 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.85
SNX9Q9Y5X1 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.39■□□□□ 0.85
SNX9Q9Y5X1 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.39■□□□□ 0.85
SNX9Q9Y5X1 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.39■□□□□ 0.85
SNX9Q9Y5X1 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.39■□□□□ 0.85
SNX9Q9Y5X1 AC005363.2-201ENST00000618631 242 ntBASIC20.39■□□□□ 0.85
SNX9Q9Y5X1 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.39■□□□□ 0.85
SNX9Q9Y5X1 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SNX9Q9Y5X1 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.39■□□□□ 0.85
SNX9Q9Y5X1 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SNX9Q9Y5X1 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNX9Q9Y5X1 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNX9Q9Y5X1 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNX9Q9Y5X1 AC141586.3-201ENST00000562166 1838 ntBASIC20.39■□□□□ 0.85
SNX9Q9Y5X1 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNX9Q9Y5X1 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNX9Q9Y5X1 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNX9Q9Y5X1 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SNX9Q9Y5X1 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNX9Q9Y5X1 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNX9Q9Y5X1 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.38■□□□□ 0.85
SNX9Q9Y5X1 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SNX9Q9Y5X1 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.38■□□□□ 0.85
SNX9Q9Y5X1 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNX9Q9Y5X1 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SNX9Q9Y5X1 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SNX9Q9Y5X1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms