Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHGC4Q9Y5F7 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGC4Q9Y5F7 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGC4Q9Y5F7 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHGC4Q9Y5F7 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHGC4Q9Y5F7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGC4Q9Y5F7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGC4Q9Y5F7 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
PCDHGC4Q9Y5F7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGC4Q9Y5F7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGC4Q9Y5F7 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGC4Q9Y5F7 PRSS44-201ENST00000515154 1146 ntBASIC19.26■□□□□ 0.67
PCDHGC4Q9Y5F7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDHGC4Q9Y5F7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDHGC4Q9Y5F7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.26■□□□□ 0.67
PCDHGC4Q9Y5F7 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDHGC4Q9Y5F7 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHGC4Q9Y5F7 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGC4Q9Y5F7 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHGC4Q9Y5F7 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGC4Q9Y5F7 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGC4Q9Y5F7 IRX1P1-201ENST00000438849 1838 ntBASIC19.25■□□□□ 0.67
PCDHGC4Q9Y5F7 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHGC4Q9Y5F7 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGC4Q9Y5F7 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
PCDHGC4Q9Y5F7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGC4Q9Y5F7 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGC4Q9Y5F7 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHGC4Q9Y5F7 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGC4Q9Y5F7 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGC4Q9Y5F7 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGC4Q9Y5F7 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHGC4Q9Y5F7 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHGC4Q9Y5F7 AP005242.2-201ENST00000580065 1175 ntBASIC19.25■□□□□ 0.67
PCDHGC4Q9Y5F7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGC4Q9Y5F7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
PCDHGC4Q9Y5F7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHGC4Q9Y5F7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHGC4Q9Y5F7 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGC4Q9Y5F7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PCDHGC4Q9Y5F7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGC4Q9Y5F7 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHGC4Q9Y5F7 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGC4Q9Y5F7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PCDHGC4Q9Y5F7 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGC4Q9Y5F7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGC4Q9Y5F7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
PCDHGC4Q9Y5F7 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PCDHGC4Q9Y5F7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGC4Q9Y5F7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PCDHGC4Q9Y5F7 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGC4Q9Y5F7 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGC4Q9Y5F7 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
PCDHGC4Q9Y5F7 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDHGC4Q9Y5F7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGC4Q9Y5F7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGC4Q9Y5F7 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGC4Q9Y5F7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDHGC4Q9Y5F7 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGC4Q9Y5F7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDHGC4Q9Y5F7 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGC4Q9Y5F7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGC4Q9Y5F7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGC4Q9Y5F7 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGC4Q9Y5F7 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGC4Q9Y5F7 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
PCDHGC4Q9Y5F7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
PCDHGC4Q9Y5F7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGC4Q9Y5F7 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGC4Q9Y5F7 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
PCDHGC4Q9Y5F7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGC4Q9Y5F7 CYP2D8P-201ENST00000433633 1490 ntBASIC19.23■□□□□ 0.67
PCDHGC4Q9Y5F7 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDHGC4Q9Y5F7 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.23■□□□□ 0.67
PCDHGC4Q9Y5F7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGC4Q9Y5F7 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDHGC4Q9Y5F7 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGC4Q9Y5F7 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGC4Q9Y5F7 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGC4Q9Y5F7 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGC4Q9Y5F7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGC4Q9Y5F7 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGC4Q9Y5F7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.23■□□□□ 0.67
PCDHGC4Q9Y5F7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.23■□□□□ 0.67
PCDHGC4Q9Y5F7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGC4Q9Y5F7 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGC4Q9Y5F7 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
PCDHGC4Q9Y5F7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGC4Q9Y5F7 AC120498.9-201ENST00000339021 3867 ntBASIC19.23■□□□□ 0.67
PCDHGC4Q9Y5F7 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGC4Q9Y5F7 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGC4Q9Y5F7 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PCDHGC4Q9Y5F7 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.23■□□□□ 0.67
PCDHGC4Q9Y5F7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDHGC4Q9Y5F7 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHGC4Q9Y5F7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGC4Q9Y5F7 FEM1AP3-201ENST00000403722 1741 ntBASIC19.22■□□□□ 0.67
PCDHGC4Q9Y5F7 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGC4Q9Y5F7 AL049812.1-201ENST00000432563 2267 ntBASIC19.22■□□□□ 0.67
PCDHGC4Q9Y5F7 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms