Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
PCDHB13Q9Y5F0 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHB13Q9Y5F0 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDHB13Q9Y5F0 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHB13Q9Y5F0 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHB13Q9Y5F0 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHB13Q9Y5F0 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHB13Q9Y5F0 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHB13Q9Y5F0 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHB13Q9Y5F0 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHB13Q9Y5F0 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
PCDHB13Q9Y5F0 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHB13Q9Y5F0 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHB13Q9Y5F0 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.06■□□□□ 0.96
PCDHB13Q9Y5F0 TSPY23P-201ENST00000440136 739 ntBASIC21.06■□□□□ 0.96
PCDHB13Q9Y5F0 AL355355.2-201ENST00000442321 338 ntBASIC21.06■□□□□ 0.96
PCDHB13Q9Y5F0 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.06■□□□□ 0.96
PCDHB13Q9Y5F0 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHB13Q9Y5F0 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.06■□□□□ 0.96
PCDHB13Q9Y5F0 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.06■□□□□ 0.96
PCDHB13Q9Y5F0 FP475955.4-201ENST00000623131 1990 ntBASIC21.06■□□□□ 0.96
PCDHB13Q9Y5F0 FEM1AP3-201ENST00000403722 1741 ntBASIC21.06■□□□□ 0.96
PCDHB13Q9Y5F0 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHB13Q9Y5F0 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
PCDHB13Q9Y5F0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHB13Q9Y5F0 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHB13Q9Y5F0 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.05■□□□□ 0.96
PCDHB13Q9Y5F0 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHB13Q9Y5F0 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDHB13Q9Y5F0 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHB13Q9Y5F0 AC098818.2-201ENST00000564925 2320 ntBASIC21.05■□□□□ 0.96
PCDHB13Q9Y5F0 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHB13Q9Y5F0 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHB13Q9Y5F0 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHB13Q9Y5F0 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
PCDHB13Q9Y5F0 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
PCDHB13Q9Y5F0 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHB13Q9Y5F0 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHB13Q9Y5F0 MESTP1-201ENST00000404287 994 ntBASIC21.05■□□□□ 0.96
PCDHB13Q9Y5F0 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.05■□□□□ 0.96
PCDHB13Q9Y5F0 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHB13Q9Y5F0 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.05■□□□□ 0.96
PCDHB13Q9Y5F0 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.05■□□□□ 0.96
PCDHB13Q9Y5F0 AC026471.5-201ENST00000615068 467 ntBASIC21.05■□□□□ 0.96
PCDHB13Q9Y5F0 IRX1P1-201ENST00000438849 1838 ntBASIC21.05■□□□□ 0.96
PCDHB13Q9Y5F0 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDHB13Q9Y5F0 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHB13Q9Y5F0 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.05■□□□□ 0.96
PCDHB13Q9Y5F0 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHB13Q9Y5F0 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
PCDHB13Q9Y5F0 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHB13Q9Y5F0 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDHB13Q9Y5F0 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHB13Q9Y5F0 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB13Q9Y5F0 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PCDHB13Q9Y5F0 AC018445.3-201ENST00000624177 1945 ntBASIC21.04■□□□□ 0.96
PCDHB13Q9Y5F0 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
PCDHB13Q9Y5F0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PCDHB13Q9Y5F0 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PCDHB13Q9Y5F0 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
PCDHB13Q9Y5F0 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDHB13Q9Y5F0 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
PCDHB13Q9Y5F0 FAM207BP-201ENST00000447172 505 ntBASIC21.04■□□□□ 0.96
PCDHB13Q9Y5F0 AC008040.2-201ENST00000461049 708 ntBASIC21.04■□□□□ 0.96
PCDHB13Q9Y5F0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDHB13Q9Y5F0 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDHB13Q9Y5F0 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.04■□□□□ 0.96
PCDHB13Q9Y5F0 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDHB13Q9Y5F0 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.04■□□□□ 0.96
PCDHB13Q9Y5F0 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.04■□□□□ 0.96
PCDHB13Q9Y5F0 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB13Q9Y5F0 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB13Q9Y5F0 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB13Q9Y5F0 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB13Q9Y5F0 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.04■□□□□ 0.96
PCDHB13Q9Y5F0 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.04■□□□□ 0.96
PCDHB13Q9Y5F0 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB13Q9Y5F0 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.03■□□□□ 0.96
PCDHB13Q9Y5F0 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDHB13Q9Y5F0 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHB13Q9Y5F0 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHB13Q9Y5F0 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHB13Q9Y5F0 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.03■□□□□ 0.96
PCDHB13Q9Y5F0 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDHB13Q9Y5F0 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
PCDHB13Q9Y5F0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDHB13Q9Y5F0 PRSS44-201ENST00000515154 1146 ntBASIC21.03■□□□□ 0.96
PCDHB13Q9Y5F0 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDHB13Q9Y5F0 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDHB13Q9Y5F0 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHB13Q9Y5F0 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
PCDHB13Q9Y5F0 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDHB13Q9Y5F0 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
PCDHB13Q9Y5F0 AL161938.1-201ENST00000569833 2180 ntBASIC21.03■□□□□ 0.96
PCDHB13Q9Y5F0 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHB13Q9Y5F0 KRT8P11-201ENST00000409686 1436 ntBASIC21.03■□□□□ 0.96
PCDHB13Q9Y5F0 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHB13Q9Y5F0 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHB13Q9Y5F0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
PCDHB13Q9Y5F0 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms