Protein–RNA interactions for Protein: Q9UKN5

PRDM4, PR domain zinc finger protein 4, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4Q9UKN5 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PRDM4Q9UKN5 AL355001.2-201ENST00000620617 1191 ntBASIC19.67■□□□□ 0.74
PRDM4Q9UKN5 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRDM4Q9UKN5 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
PRDM4Q9UKN5 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PRDM4Q9UKN5 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PRDM4Q9UKN5 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PRDM4Q9UKN5 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.67■□□□□ 0.74
PRDM4Q9UKN5 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRDM4Q9UKN5 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRDM4Q9UKN5 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PRDM4Q9UKN5 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRDM4Q9UKN5 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PRDM4Q9UKN5 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.66■□□□□ 0.74
PRDM4Q9UKN5 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRDM4Q9UKN5 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.66■□□□□ 0.74
PRDM4Q9UKN5 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.66■□□□□ 0.74
PRDM4Q9UKN5 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PRDM4Q9UKN5 AC027682.1-201ENST00000562846 899 ntBASIC19.66■□□□□ 0.74
PRDM4Q9UKN5 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.66■□□□□ 0.74
PRDM4Q9UKN5 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRDM4Q9UKN5 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRDM4Q9UKN5 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
PRDM4Q9UKN5 HTR7P1-202ENST00000624664 4411 ntBASIC19.66■□□□□ 0.74
PRDM4Q9UKN5 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRDM4Q9UKN5 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRDM4Q9UKN5 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRDM4Q9UKN5 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PRDM4Q9UKN5 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PRDM4Q9UKN5 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PRDM4Q9UKN5 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.65■□□□□ 0.74
PRDM4Q9UKN5 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC19.65■□□□□ 0.74
PRDM4Q9UKN5 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.65■□□□□ 0.74
PRDM4Q9UKN5 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRDM4Q9UKN5 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.65■□□□□ 0.74
PRDM4Q9UKN5 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRDM4Q9UKN5 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRDM4Q9UKN5 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PRDM4Q9UKN5 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.65■□□□□ 0.74
PRDM4Q9UKN5 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRDM4Q9UKN5 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRDM4Q9UKN5 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRDM4Q9UKN5 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
PRDM4Q9UKN5 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRDM4Q9UKN5 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PRDM4Q9UKN5 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PRDM4Q9UKN5 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
PRDM4Q9UKN5 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PRDM4Q9UKN5 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PRDM4Q9UKN5 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PRDM4Q9UKN5 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
PRDM4Q9UKN5 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
PRDM4Q9UKN5 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.64■□□□□ 0.73
PRDM4Q9UKN5 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.64■□□□□ 0.73
PRDM4Q9UKN5 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
PRDM4Q9UKN5 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRDM4Q9UKN5 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRDM4Q9UKN5 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PRDM4Q9UKN5 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PRDM4Q9UKN5 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.64■□□□□ 0.73
PRDM4Q9UKN5 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRDM4Q9UKN5 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.64■□□□□ 0.73
PRDM4Q9UKN5 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
PRDM4Q9UKN5 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
PRDM4Q9UKN5 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.64■□□□□ 0.73
PRDM4Q9UKN5 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRDM4Q9UKN5 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRDM4Q9UKN5 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRDM4Q9UKN5 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC19.63■□□□□ 0.73
PRDM4Q9UKN5 PP12613-201ENST00000424958 2230 ntBASIC19.63■□□□□ 0.73
PRDM4Q9UKN5 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRDM4Q9UKN5 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PRDM4Q9UKN5 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PRDM4Q9UKN5 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRDM4Q9UKN5 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRDM4Q9UKN5 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRDM4Q9UKN5 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PRDM4Q9UKN5 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.63■□□□□ 0.73
PRDM4Q9UKN5 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRDM4Q9UKN5 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PRDM4Q9UKN5 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
PRDM4Q9UKN5 PBX2P1-201ENST00000493219 1291 ntBASIC19.63■□□□□ 0.73
PRDM4Q9UKN5 IGHV3-19-201ENST00000521488 291 ntBASIC19.63■□□□□ 0.73
PRDM4Q9UKN5 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
PRDM4Q9UKN5 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.63■□□□□ 0.73
PRDM4Q9UKN5 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRDM4Q9UKN5 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRDM4Q9UKN5 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PRDM4Q9UKN5 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRDM4Q9UKN5 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PRDM4Q9UKN5 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.63■□□□□ 0.73
PRDM4Q9UKN5 AC105020.1-201ENST00000435356 2205 ntBASIC19.63■□□□□ 0.73
PRDM4Q9UKN5 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PRDM4Q9UKN5 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.63■□□□□ 0.73
PRDM4Q9UKN5 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRDM4Q9UKN5 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRDM4Q9UKN5 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRDM4Q9UKN5 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
PRDM4Q9UKN5 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.62■□□□□ 0.73
PRDM4Q9UKN5 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms