Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHD7Q9P2D1 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.23■□□□□ 0.83
CHD7Q9P2D1 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.23■□□□□ 0.83
CHD7Q9P2D1 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.23■□□□□ 0.83
CHD7Q9P2D1 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHD7Q9P2D1 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.23■□□□□ 0.83
CHD7Q9P2D1 AL391807.1-203ENST00000604392 2365 ntBASIC20.23■□□□□ 0.83
CHD7Q9P2D1 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHD7Q9P2D1 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.23■□□□□ 0.83
CHD7Q9P2D1 LINC00265-3P-201ENST00000447588 903 ntBASIC20.23■□□□□ 0.83
CHD7Q9P2D1 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.23■□□□□ 0.83
CHD7Q9P2D1 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.23■□□□□ 0.83
CHD7Q9P2D1 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHD7Q9P2D1 AL121772.3-201ENST00000610840 674 ntBASIC20.23■□□□□ 0.83
CHD7Q9P2D1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHD7Q9P2D1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHD7Q9P2D1 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHD7Q9P2D1 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHD7Q9P2D1 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CHD7Q9P2D1 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.22■□□□□ 0.83
CHD7Q9P2D1 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CHD7Q9P2D1 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.22■□□□□ 0.83
CHD7Q9P2D1 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.22■□□□□ 0.83
CHD7Q9P2D1 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHD7Q9P2D1 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CHD7Q9P2D1 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.22■□□□□ 0.83
CHD7Q9P2D1 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.22■□□□□ 0.83
CHD7Q9P2D1 AL773604.1-201ENST00000617417 272 ntBASIC20.22■□□□□ 0.83
CHD7Q9P2D1 AC233702.3-201ENST00000578656 1387 ntBASIC20.22■□□□□ 0.83
CHD7Q9P2D1 AL512408.1-201ENST00000569378 2000 ntBASIC20.22■□□□□ 0.83
CHD7Q9P2D1 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.22■□□□□ 0.83
CHD7Q9P2D1 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHD7Q9P2D1 AC073314.1-201ENST00000568729 2216 ntBASIC20.22■□□□□ 0.83
CHD7Q9P2D1 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
CHD7Q9P2D1 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CHD7Q9P2D1 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.22■□□□□ 0.83
CHD7Q9P2D1 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHD7Q9P2D1 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CHD7Q9P2D1 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.22■□□□□ 0.83
CHD7Q9P2D1 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHD7Q9P2D1 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.22■□□□□ 0.83
CHD7Q9P2D1 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.22■□□□□ 0.83
CHD7Q9P2D1 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHD7Q9P2D1 AP005212.1-201ENST00000581547 1997 ntBASIC20.21■□□□□ 0.83
CHD7Q9P2D1 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHD7Q9P2D1 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.21■□□□□ 0.83
CHD7Q9P2D1 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHD7Q9P2D1 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHD7Q9P2D1 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHD7Q9P2D1 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CHD7Q9P2D1 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHD7Q9P2D1 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHD7Q9P2D1 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHD7Q9P2D1 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHD7Q9P2D1 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHD7Q9P2D1 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
CHD7Q9P2D1 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.21■□□□□ 0.83
CHD7Q9P2D1 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHD7Q9P2D1 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHD7Q9P2D1 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHD7Q9P2D1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
CHD7Q9P2D1 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHD7Q9P2D1 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHD7Q9P2D1 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.21■□□□□ 0.83
CHD7Q9P2D1 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.21■□□□□ 0.83
CHD7Q9P2D1 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.21■□□□□ 0.83
CHD7Q9P2D1 KRT18P58-201ENST00000527480 1120 ntBASIC20.21■□□□□ 0.83
CHD7Q9P2D1 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.21■□□□□ 0.83
CHD7Q9P2D1 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.21■□□□□ 0.83
CHD7Q9P2D1 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHD7Q9P2D1 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHD7Q9P2D1 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHD7Q9P2D1 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.21■□□□□ 0.83
CHD7Q9P2D1 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHD7Q9P2D1 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CHD7Q9P2D1 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHD7Q9P2D1 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHD7Q9P2D1 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.2■□□□□ 0.82
CHD7Q9P2D1 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.2■□□□□ 0.82
CHD7Q9P2D1 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.2■□□□□ 0.82
CHD7Q9P2D1 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.2■□□□□ 0.82
CHD7Q9P2D1 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHD7Q9P2D1 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CHD7Q9P2D1 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHD7Q9P2D1 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHD7Q9P2D1 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHD7Q9P2D1 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
CHD7Q9P2D1 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.2■□□□□ 0.82
CHD7Q9P2D1 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.2■□□□□ 0.82
CHD7Q9P2D1 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.2■□□□□ 0.82
CHD7Q9P2D1 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHD7Q9P2D1 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.2■□□□□ 0.82
CHD7Q9P2D1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHD7Q9P2D1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.2■□□□□ 0.82
CHD7Q9P2D1 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC20.2■□□□□ 0.82
CHD7Q9P2D1 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHD7Q9P2D1 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.2■□□□□ 0.82
CHD7Q9P2D1 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CHD7Q9P2D1 AL355385.1-201ENST00000606123 409 ntBASIC20.2■□□□□ 0.82
CHD7Q9P2D1 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms