Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.69■□□□□ 0.42
HPF1Q9NWY4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.69■□□□□ 0.42
HPF1Q9NWY4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HPF1Q9NWY4 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
HPF1Q9NWY4 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HPF1Q9NWY4 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HPF1Q9NWY4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HPF1Q9NWY4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
HPF1Q9NWY4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.69■□□□□ 0.42
HPF1Q9NWY4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
HPF1Q9NWY4 ZNF815P-204ENST00000434898 1737 ntBASIC17.69■□□□□ 0.42
HPF1Q9NWY4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HPF1Q9NWY4 KRT18P22-201ENST00000402024 1347 ntBASIC17.69■□□□□ 0.42
HPF1Q9NWY4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
HPF1Q9NWY4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.69■□□□□ 0.42
HPF1Q9NWY4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.69■□□□□ 0.42
HPF1Q9NWY4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HPF1Q9NWY4 HCG11-201ENST00000411553 5696 ntBASIC17.68■□□□□ 0.42
HPF1Q9NWY4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HPF1Q9NWY4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.68■□□□□ 0.42
HPF1Q9NWY4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HPF1Q9NWY4 AC096733.2-201ENST00000609937 1394 ntBASIC17.68■□□□□ 0.42
HPF1Q9NWY4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.68■□□□□ 0.42
HPF1Q9NWY4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HPF1Q9NWY4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.68■□□□□ 0.42
HPF1Q9NWY4 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HPF1Q9NWY4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HPF1Q9NWY4 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.68■□□□□ 0.42
HPF1Q9NWY4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.68■□□□□ 0.42
HPF1Q9NWY4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HPF1Q9NWY4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.68■□□□□ 0.42
HPF1Q9NWY4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HPF1Q9NWY4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.68■□□□□ 0.42
HPF1Q9NWY4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HPF1Q9NWY4 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.68■□□□□ 0.42
HPF1Q9NWY4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HPF1Q9NWY4 AC010947.1-201ENST00000623454 693 ntBASIC17.68■□□□□ 0.42
HPF1Q9NWY4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
HPF1Q9NWY4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HPF1Q9NWY4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
HPF1Q9NWY4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.68■□□□□ 0.42
HPF1Q9NWY4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HPF1Q9NWY4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HPF1Q9NWY4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
HPF1Q9NWY4 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HPF1Q9NWY4 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HPF1Q9NWY4 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.68■□□□□ 0.42
HPF1Q9NWY4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
HPF1Q9NWY4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HPF1Q9NWY4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.67■□□□□ 0.42
HPF1Q9NWY4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HPF1Q9NWY4 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HPF1Q9NWY4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.67■□□□□ 0.42
HPF1Q9NWY4 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
HPF1Q9NWY4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.67■□□□□ 0.42
HPF1Q9NWY4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HPF1Q9NWY4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HPF1Q9NWY4 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
HPF1Q9NWY4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HPF1Q9NWY4 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.67■□□□□ 0.42
HPF1Q9NWY4 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.67■□□□□ 0.42
HPF1Q9NWY4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HPF1Q9NWY4 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.67■□□□□ 0.42
HPF1Q9NWY4 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.67■□□□□ 0.42
HPF1Q9NWY4 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HPF1Q9NWY4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.67■□□□□ 0.42
HPF1Q9NWY4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.67■□□□□ 0.42
HPF1Q9NWY4 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HPF1Q9NWY4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HPF1Q9NWY4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HPF1Q9NWY4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HPF1Q9NWY4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HPF1Q9NWY4 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HPF1Q9NWY4 KRT8P41-201ENST00000533985 1514 ntBASIC17.67■□□□□ 0.42
HPF1Q9NWY4 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.67■□□□□ 0.42
HPF1Q9NWY4 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HPF1Q9NWY4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPF1Q9NWY4 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPF1Q9NWY4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
HPF1Q9NWY4 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.66■□□□□ 0.42
HPF1Q9NWY4 AC104417.2-201ENST00000562989 1793 ntBASIC17.66■□□□□ 0.42
HPF1Q9NWY4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPF1Q9NWY4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPF1Q9NWY4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPF1Q9NWY4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPF1Q9NWY4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPF1Q9NWY4 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.66■□□□□ 0.42
HPF1Q9NWY4 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.66■□□□□ 0.42
HPF1Q9NWY4 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.66■□□□□ 0.42
HPF1Q9NWY4 AC128688.1-201ENST00000487626 519 ntBASIC17.66■□□□□ 0.42
HPF1Q9NWY4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
HPF1Q9NWY4 AC005363.2-201ENST00000618631 242 ntBASIC17.66■□□□□ 0.42
HPF1Q9NWY4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPF1Q9NWY4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.66■□□□□ 0.42
HPF1Q9NWY4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
HPF1Q9NWY4 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPF1Q9NWY4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
HPF1Q9NWY4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HPF1Q9NWY4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
HPF1Q9NWY4 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms