Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ABCF3Q9NUQ8 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
ABCF3Q9NUQ8 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ABCF3Q9NUQ8 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ABCF3Q9NUQ8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ABCF3Q9NUQ8 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ABCF3Q9NUQ8 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
ABCF3Q9NUQ8 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ABCF3Q9NUQ8 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.37■□□□□ 0.69
ABCF3Q9NUQ8 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ABCF3Q9NUQ8 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.37■□□□□ 0.69
ABCF3Q9NUQ8 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.37■□□□□ 0.69
ABCF3Q9NUQ8 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ABCF3Q9NUQ8 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ABCF3Q9NUQ8 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ABCF3Q9NUQ8 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ABCF3Q9NUQ8 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
ABCF3Q9NUQ8 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
ABCF3Q9NUQ8 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ABCF3Q9NUQ8 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.36■□□□□ 0.69
ABCF3Q9NUQ8 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.36■□□□□ 0.69
ABCF3Q9NUQ8 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
ABCF3Q9NUQ8 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
ABCF3Q9NUQ8 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ABCF3Q9NUQ8 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ABCF3Q9NUQ8 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
ABCF3Q9NUQ8 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ABCF3Q9NUQ8 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
ABCF3Q9NUQ8 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.36■□□□□ 0.69
ABCF3Q9NUQ8 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.36■□□□□ 0.69
ABCF3Q9NUQ8 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ABCF3Q9NUQ8 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ABCF3Q9NUQ8 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
ABCF3Q9NUQ8 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ABCF3Q9NUQ8 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ABCF3Q9NUQ8 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ABCF3Q9NUQ8 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ABCF3Q9NUQ8 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ABCF3Q9NUQ8 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ABCF3Q9NUQ8 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ABCF3Q9NUQ8 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.35■□□□□ 0.69
ABCF3Q9NUQ8 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ABCF3Q9NUQ8 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ABCF3Q9NUQ8 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ABCF3Q9NUQ8 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.35■□□□□ 0.69
ABCF3Q9NUQ8 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ABCF3Q9NUQ8 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ABCF3Q9NUQ8 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ABCF3Q9NUQ8 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ABCF3Q9NUQ8 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ABCF3Q9NUQ8 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ABCF3Q9NUQ8 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.35■□□□□ 0.69
ABCF3Q9NUQ8 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ABCF3Q9NUQ8 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.35■□□□□ 0.69
ABCF3Q9NUQ8 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ABCF3Q9NUQ8 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.35■□□□□ 0.69
ABCF3Q9NUQ8 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ABCF3Q9NUQ8 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.35■□□□□ 0.69
ABCF3Q9NUQ8 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ABCF3Q9NUQ8 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ABCF3Q9NUQ8 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
ABCF3Q9NUQ8 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
ABCF3Q9NUQ8 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ABCF3Q9NUQ8 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.35■□□□□ 0.69
ABCF3Q9NUQ8 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.34■□□□□ 0.69
ABCF3Q9NUQ8 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ABCF3Q9NUQ8 KRT16P6-202ENST00000425692 1426 ntBASIC19.34■□□□□ 0.69
ABCF3Q9NUQ8 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.34■□□□□ 0.69
ABCF3Q9NUQ8 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ABCF3Q9NUQ8 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ABCF3Q9NUQ8 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ABCF3Q9NUQ8 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ABCF3Q9NUQ8 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.34■□□□□ 0.69
ABCF3Q9NUQ8 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ABCF3Q9NUQ8 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ABCF3Q9NUQ8 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ABCF3Q9NUQ8 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
ABCF3Q9NUQ8 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ABCF3Q9NUQ8 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.34■□□□□ 0.69
ABCF3Q9NUQ8 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ABCF3Q9NUQ8 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ABCF3Q9NUQ8 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.34■□□□□ 0.69
ABCF3Q9NUQ8 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.34■□□□□ 0.69
ABCF3Q9NUQ8 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.34■□□□□ 0.69
ABCF3Q9NUQ8 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
ABCF3Q9NUQ8 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.34■□□□□ 0.69
ABCF3Q9NUQ8 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ABCF3Q9NUQ8 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ABCF3Q9NUQ8 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.34■□□□□ 0.69
ABCF3Q9NUQ8 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
ABCF3Q9NUQ8 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ABCF3Q9NUQ8 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
ABCF3Q9NUQ8 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.33■□□□□ 0.69
ABCF3Q9NUQ8 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
ABCF3Q9NUQ8 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
ABCF3Q9NUQ8 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ABCF3Q9NUQ8 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.33■□□□□ 0.69
ABCF3Q9NUQ8 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.33■□□□□ 0.69
ABCF3Q9NUQ8 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ABCF3Q9NUQ8 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms