Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
VCX3AQ9NNX9 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
VCX3AQ9NNX9 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VCX3AQ9NNX9 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.82■□□□□ 0.44
VCX3AQ9NNX9 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
VCX3AQ9NNX9 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VCX3AQ9NNX9 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VCX3AQ9NNX9 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VCX3AQ9NNX9 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VCX3AQ9NNX9 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.81■□□□□ 0.44
VCX3AQ9NNX9 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VCX3AQ9NNX9 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
VCX3AQ9NNX9 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
VCX3AQ9NNX9 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
VCX3AQ9NNX9 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
VCX3AQ9NNX9 AC012317.2-201ENST00000623305 2251 ntBASIC17.81■□□□□ 0.44
VCX3AQ9NNX9 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
VCX3AQ9NNX9 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VCX3AQ9NNX9 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
VCX3AQ9NNX9 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VCX3AQ9NNX9 GNAS-203ENST00000306120 1878 ntBASIC17.81■□□□□ 0.44
VCX3AQ9NNX9 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VCX3AQ9NNX9 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VCX3AQ9NNX9 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VCX3AQ9NNX9 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VCX3AQ9NNX9 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.81■□□□□ 0.44
VCX3AQ9NNX9 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VCX3AQ9NNX9 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VCX3AQ9NNX9 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.81■□□□□ 0.44
VCX3AQ9NNX9 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.81■□□□□ 0.44
VCX3AQ9NNX9 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
VCX3AQ9NNX9 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.81■□□□□ 0.44
VCX3AQ9NNX9 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
VCX3AQ9NNX9 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VCX3AQ9NNX9 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VCX3AQ9NNX9 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VCX3AQ9NNX9 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
VCX3AQ9NNX9 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VCX3AQ9NNX9 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VCX3AQ9NNX9 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VCX3AQ9NNX9 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.8■□□□□ 0.44
VCX3AQ9NNX9 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VCX3AQ9NNX9 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VCX3AQ9NNX9 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VCX3AQ9NNX9 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VCX3AQ9NNX9 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
VCX3AQ9NNX9 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VCX3AQ9NNX9 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VCX3AQ9NNX9 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VCX3AQ9NNX9 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.8■□□□□ 0.44
VCX3AQ9NNX9 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.8■□□□□ 0.44
VCX3AQ9NNX9 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.8■□□□□ 0.44
VCX3AQ9NNX9 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
VCX3AQ9NNX9 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.8■□□□□ 0.44
VCX3AQ9NNX9 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.8■□□□□ 0.44
VCX3AQ9NNX9 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VCX3AQ9NNX9 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VCX3AQ9NNX9 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VCX3AQ9NNX9 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
VCX3AQ9NNX9 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VCX3AQ9NNX9 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VCX3AQ9NNX9 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VCX3AQ9NNX9 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.8■□□□□ 0.44
VCX3AQ9NNX9 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.8■□□□□ 0.44
VCX3AQ9NNX9 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VCX3AQ9NNX9 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VCX3AQ9NNX9 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
VCX3AQ9NNX9 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VCX3AQ9NNX9 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VCX3AQ9NNX9 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.8■□□□□ 0.44
VCX3AQ9NNX9 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VCX3AQ9NNX9 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VCX3AQ9NNX9 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
VCX3AQ9NNX9 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
VCX3AQ9NNX9 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VCX3AQ9NNX9 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VCX3AQ9NNX9 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VCX3AQ9NNX9 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
VCX3AQ9NNX9 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VCX3AQ9NNX9 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VCX3AQ9NNX9 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VCX3AQ9NNX9 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VCX3AQ9NNX9 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VCX3AQ9NNX9 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
VCX3AQ9NNX9 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.79■□□□□ 0.44
VCX3AQ9NNX9 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
VCX3AQ9NNX9 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.79■□□□□ 0.44
VCX3AQ9NNX9 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VCX3AQ9NNX9 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VCX3AQ9NNX9 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VCX3AQ9NNX9 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
VCX3AQ9NNX9 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VCX3AQ9NNX9 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VCX3AQ9NNX9 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
VCX3AQ9NNX9 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
VCX3AQ9NNX9 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
VCX3AQ9NNX9 KRT16P2-201ENST00000414673 1423 ntBASIC17.79■□□□□ 0.44
VCX3AQ9NNX9 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.79■□□□□ 0.44
VCX3AQ9NNX9 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.79■□□□□ 0.44
VCX3AQ9NNX9 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms