Protein–RNA interactions for Protein: Q9H7V2

SYNDIG1, Synapse differentiation-inducing gene protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNDIG1Q9H7V2 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
SYNDIG1Q9H7V2 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SYNDIG1Q9H7V2 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.63■□□□□ 0.57
SYNDIG1Q9H7V2 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYNDIG1Q9H7V2 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SYNDIG1Q9H7V2 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
SYNDIG1Q9H7V2 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.62■□□□□ 0.57
SYNDIG1Q9H7V2 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
SYNDIG1Q9H7V2 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SYNDIG1Q9H7V2 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SYNDIG1Q9H7V2 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SYNDIG1Q9H7V2 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.62■□□□□ 0.57
SYNDIG1Q9H7V2 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SYNDIG1Q9H7V2 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SYNDIG1Q9H7V2 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.62■□□□□ 0.57
SYNDIG1Q9H7V2 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.62■□□□□ 0.57
SYNDIG1Q9H7V2 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.62■□□□□ 0.57
SYNDIG1Q9H7V2 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.62■□□□□ 0.57
SYNDIG1Q9H7V2 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
SYNDIG1Q9H7V2 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SYNDIG1Q9H7V2 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SYNDIG1Q9H7V2 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SYNDIG1Q9H7V2 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SYNDIG1Q9H7V2 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.62■□□□□ 0.57
SYNDIG1Q9H7V2 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SYNDIG1Q9H7V2 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.62■□□□□ 0.57
SYNDIG1Q9H7V2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SYNDIG1Q9H7V2 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SYNDIG1Q9H7V2 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SYNDIG1Q9H7V2 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SYNDIG1Q9H7V2 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
SYNDIG1Q9H7V2 AC073314.1-201ENST00000568729 2216 ntBASIC18.61■□□□□ 0.57
SYNDIG1Q9H7V2 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SYNDIG1Q9H7V2 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
SYNDIG1Q9H7V2 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SYNDIG1Q9H7V2 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYNDIG1Q9H7V2 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYNDIG1Q9H7V2 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.61■□□□□ 0.57
SYNDIG1Q9H7V2 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
SYNDIG1Q9H7V2 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SYNDIG1Q9H7V2 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.61■□□□□ 0.57
SYNDIG1Q9H7V2 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYNDIG1Q9H7V2 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYNDIG1Q9H7V2 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SYNDIG1Q9H7V2 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SYNDIG1Q9H7V2 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.61■□□□□ 0.57
SYNDIG1Q9H7V2 TSPY17P-201ENST00000450329 467 ntBASIC18.61■□□□□ 0.57
SYNDIG1Q9H7V2 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.61■□□□□ 0.57
SYNDIG1Q9H7V2 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.61■□□□□ 0.57
SYNDIG1Q9H7V2 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
SYNDIG1Q9H7V2 AC010653.2-201ENST00000623505 997 ntBASIC18.61■□□□□ 0.57
SYNDIG1Q9H7V2 AC141257.4-201ENST00000634557 245 ntBASIC18.61■□□□□ 0.57
SYNDIG1Q9H7V2 AC136944.6-201ENST00000634818 245 ntBASIC18.61■□□□□ 0.57
SYNDIG1Q9H7V2 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYNDIG1Q9H7V2 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYNDIG1Q9H7V2 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SYNDIG1Q9H7V2 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYNDIG1Q9H7V2 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYNDIG1Q9H7V2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SYNDIG1Q9H7V2 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SYNDIG1Q9H7V2 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SYNDIG1Q9H7V2 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.6■□□□□ 0.57
SYNDIG1Q9H7V2 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYNDIG1Q9H7V2 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYNDIG1Q9H7V2 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYNDIG1Q9H7V2 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.6■□□□□ 0.57
SYNDIG1Q9H7V2 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYNDIG1Q9H7V2 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SYNDIG1Q9H7V2 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYNDIG1Q9H7V2 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYNDIG1Q9H7V2 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.6■□□□□ 0.57
SYNDIG1Q9H7V2 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.6■□□□□ 0.57
SYNDIG1Q9H7V2 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SYNDIG1Q9H7V2 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
SYNDIG1Q9H7V2 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.6■□□□□ 0.57
SYNDIG1Q9H7V2 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.6■□□□□ 0.57
SYNDIG1Q9H7V2 AC140113.3-201ENST00000605663 199 ntBASIC18.6■□□□□ 0.57
SYNDIG1Q9H7V2 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYNDIG1Q9H7V2 AL138966.2-201ENST00000621997 464 ntBASIC18.6■□□□□ 0.57
SYNDIG1Q9H7V2 AL023973.1-201ENST00000624619 620 ntBASIC18.6■□□□□ 0.57
SYNDIG1Q9H7V2 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SYNDIG1Q9H7V2 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYNDIG1Q9H7V2 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYNDIG1Q9H7V2 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
SYNDIG1Q9H7V2 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
SYNDIG1Q9H7V2 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYNDIG1Q9H7V2 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SYNDIG1Q9H7V2 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SYNDIG1Q9H7V2 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SYNDIG1Q9H7V2 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.59■□□□□ 0.57
SYNDIG1Q9H7V2 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SYNDIG1Q9H7V2 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SYNDIG1Q9H7V2 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.59■□□□□ 0.57
SYNDIG1Q9H7V2 AC092338.2-201ENST00000568827 1415 ntBASIC18.59■□□□□ 0.57
SYNDIG1Q9H7V2 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SYNDIG1Q9H7V2 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SYNDIG1Q9H7V2 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SYNDIG1Q9H7V2 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SYNDIG1Q9H7V2 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
SYNDIG1Q9H7V2 TSPY5P-201ENST00000426936 936 ntBASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms