Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.68■□□□□ 0.9
NUCKS1Q9H1E3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
NUCKS1Q9H1E3 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NUCKS1Q9H1E3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NUCKS1Q9H1E3 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
NUCKS1Q9H1E3 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NUCKS1Q9H1E3 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
NUCKS1Q9H1E3 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NUCKS1Q9H1E3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.67■□□□□ 0.9
NUCKS1Q9H1E3 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NUCKS1Q9H1E3 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
NUCKS1Q9H1E3 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NUCKS1Q9H1E3 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.67■□□□□ 0.9
NUCKS1Q9H1E3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.67■□□□□ 0.9
NUCKS1Q9H1E3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
NUCKS1Q9H1E3 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.67■□□□□ 0.9
NUCKS1Q9H1E3 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.67■□□□□ 0.9
NUCKS1Q9H1E3 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NUCKS1Q9H1E3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
NUCKS1Q9H1E3 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NUCKS1Q9H1E3 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.67■□□□□ 0.9
NUCKS1Q9H1E3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.67■□□□□ 0.9
NUCKS1Q9H1E3 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NUCKS1Q9H1E3 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NUCKS1Q9H1E3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NUCKS1Q9H1E3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.66■□□□□ 0.9
NUCKS1Q9H1E3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NUCKS1Q9H1E3 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
NUCKS1Q9H1E3 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.66■□□□□ 0.9
NUCKS1Q9H1E3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.66■□□□□ 0.9
NUCKS1Q9H1E3 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
NUCKS1Q9H1E3 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.66■□□□□ 0.9
NUCKS1Q9H1E3 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.66■□□□□ 0.9
NUCKS1Q9H1E3 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NUCKS1Q9H1E3 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NUCKS1Q9H1E3 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
NUCKS1Q9H1E3 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NUCKS1Q9H1E3 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NUCKS1Q9H1E3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NUCKS1Q9H1E3 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
NUCKS1Q9H1E3 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.66■□□□□ 0.9
NUCKS1Q9H1E3 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.66■□□□□ 0.9
NUCKS1Q9H1E3 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NUCKS1Q9H1E3 AL512353.2-201ENST00000448759 1962 ntBASIC20.66■□□□□ 0.9
NUCKS1Q9H1E3 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.66■□□□□ 0.9
NUCKS1Q9H1E3 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NUCKS1Q9H1E3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
NUCKS1Q9H1E3 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NUCKS1Q9H1E3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUCKS1Q9H1E3 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUCKS1Q9H1E3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.65■□□□□ 0.9
NUCKS1Q9H1E3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.65■□□□□ 0.9
NUCKS1Q9H1E3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUCKS1Q9H1E3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
NUCKS1Q9H1E3 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
NUCKS1Q9H1E3 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
NUCKS1Q9H1E3 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NUCKS1Q9H1E3 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NUCKS1Q9H1E3 TSPY21P-201ENST00000433481 731 ntBASIC20.65■□□□□ 0.9
NUCKS1Q9H1E3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.65■□□□□ 0.9
NUCKS1Q9H1E3 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.65■□□□□ 0.9
NUCKS1Q9H1E3 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUCKS1Q9H1E3 NEFHP1-201ENST00000412845 2629 ntBASIC20.65■□□□□ 0.9
NUCKS1Q9H1E3 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUCKS1Q9H1E3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUCKS1Q9H1E3 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.65■□□□□ 0.9
NUCKS1Q9H1E3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUCKS1Q9H1E3 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUCKS1Q9H1E3 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NUCKS1Q9H1E3 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NUCKS1Q9H1E3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
NUCKS1Q9H1E3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NUCKS1Q9H1E3 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NUCKS1Q9H1E3 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NUCKS1Q9H1E3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
NUCKS1Q9H1E3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
NUCKS1Q9H1E3 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NUCKS1Q9H1E3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NUCKS1Q9H1E3 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.64■□□□□ 0.89
NUCKS1Q9H1E3 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NUCKS1Q9H1E3 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NUCKS1Q9H1E3 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
NUCKS1Q9H1E3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NUCKS1Q9H1E3 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.64■□□□□ 0.89
NUCKS1Q9H1E3 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.64■□□□□ 0.89
NUCKS1Q9H1E3 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
NUCKS1Q9H1E3 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NUCKS1Q9H1E3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NUCKS1Q9H1E3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.64■□□□□ 0.89
NUCKS1Q9H1E3 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NUCKS1Q9H1E3 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NUCKS1Q9H1E3 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
NUCKS1Q9H1E3 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NUCKS1Q9H1E3 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.64■□□□□ 0.89
NUCKS1Q9H1E3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NUCKS1Q9H1E3 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NUCKS1Q9H1E3 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.63■□□□□ 0.89
NUCKS1Q9H1E3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NUCKS1Q9H1E3 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
NUCKS1Q9H1E3 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms