Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.11■□□□□ 0.17
HDHD3Q9BSH5 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDHD3Q9BSH5 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDHD3Q9BSH5 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.11■□□□□ 0.17
HDHD3Q9BSH5 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDHD3Q9BSH5 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDHD3Q9BSH5 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDHD3Q9BSH5 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDHD3Q9BSH5 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDHD3Q9BSH5 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.11■□□□□ 0.17
HDHD3Q9BSH5 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HDHD3Q9BSH5 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HDHD3Q9BSH5 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.1■□□□□ 0.17
HDHD3Q9BSH5 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HDHD3Q9BSH5 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.1■□□□□ 0.17
HDHD3Q9BSH5 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HDHD3Q9BSH5 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
HDHD3Q9BSH5 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HDHD3Q9BSH5 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HDHD3Q9BSH5 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HDHD3Q9BSH5 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HDHD3Q9BSH5 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.1■□□□□ 0.17
HDHD3Q9BSH5 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HDHD3Q9BSH5 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
HDHD3Q9BSH5 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HDHD3Q9BSH5 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HDHD3Q9BSH5 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HDHD3Q9BSH5 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.1■□□□□ 0.17
HDHD3Q9BSH5 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HDHD3Q9BSH5 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.1■□□□□ 0.17
HDHD3Q9BSH5 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.1■□□□□ 0.17
HDHD3Q9BSH5 PARL-206ENST00000435888 1098 ntTSL 5 BASIC16.1■□□□□ 0.17
HDHD3Q9BSH5 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.1■□□□□ 0.17
HDHD3Q9BSH5 KRT18P16-201ENST00000510337 1294 ntBASIC16.1■□□□□ 0.17
HDHD3Q9BSH5 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC16.1■□□□□ 0.17
HDHD3Q9BSH5 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.1■□□□□ 0.17
HDHD3Q9BSH5 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.1■□□□□ 0.17
HDHD3Q9BSH5 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.1■□□□□ 0.17
HDHD3Q9BSH5 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.1■□□□□ 0.17
HDHD3Q9BSH5 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HDHD3Q9BSH5 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
HDHD3Q9BSH5 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.1■□□□□ 0.17
HDHD3Q9BSH5 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
HDHD3Q9BSH5 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HDHD3Q9BSH5 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
HDHD3Q9BSH5 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HDHD3Q9BSH5 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HDHD3Q9BSH5 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HDHD3Q9BSH5 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.1■□□□□ 0.17
HDHD3Q9BSH5 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HDHD3Q9BSH5 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 FEM1AP3-201ENST00000403722 1741 ntBASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 GLI3-203ENST00000437480 451 ntTSL 2 BASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 AC098934.4-201ENST00000564127 592 ntBASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 LETM1P2-201ENST00000597330 2178 ntBASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 AL133373.2-201ENST00000623187 2828 ntBASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HDHD3Q9BSH5 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.08■□□□□ 0.17
HDHD3Q9BSH5 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HDHD3Q9BSH5 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms