Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.23■□□□□ 0.83
PCDHB18PQ96TA0 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB18PQ96TA0 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB18PQ96TA0 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDHB18PQ96TA0 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDHB18PQ96TA0 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB18PQ96TA0 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB18PQ96TA0 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
PCDHB18PQ96TA0 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB18PQ96TA0 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB18PQ96TA0 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
PCDHB18PQ96TA0 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB18PQ96TA0 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB18PQ96TA0 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHB18PQ96TA0 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHB18PQ96TA0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
PCDHB18PQ96TA0 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB18PQ96TA0 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHB18PQ96TA0 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB18PQ96TA0 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
PCDHB18PQ96TA0 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHB18PQ96TA0 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB18PQ96TA0 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB18PQ96TA0 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB18PQ96TA0 AC008040.2-201ENST00000461049 708 ntBASIC20.22■□□□□ 0.83
PCDHB18PQ96TA0 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB18PQ96TA0 AP002982.1-201ENST00000492365 877 ntBASIC20.22■□□□□ 0.83
PCDHB18PQ96TA0 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.22■□□□□ 0.83
PCDHB18PQ96TA0 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.22■□□□□ 0.83
PCDHB18PQ96TA0 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
PCDHB18PQ96TA0 AC131212.4-201ENST00000623606 975 ntBASIC20.22■□□□□ 0.83
PCDHB18PQ96TA0 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.22■□□□□ 0.83
PCDHB18PQ96TA0 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHB18PQ96TA0 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB18PQ96TA0 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB18PQ96TA0 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB18PQ96TA0 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHB18PQ96TA0 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB18PQ96TA0 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB18PQ96TA0 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB18PQ96TA0 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
PCDHB18PQ96TA0 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHB18PQ96TA0 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB18PQ96TA0 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB18PQ96TA0 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHB18PQ96TA0 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHB18PQ96TA0 NEFHP1-201ENST00000412845 2629 ntBASIC20.22■□□□□ 0.83
PCDHB18PQ96TA0 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB18PQ96TA0 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHB18PQ96TA0 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PCDHB18PQ96TA0 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB18PQ96TA0 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PCDHB18PQ96TA0 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB18PQ96TA0 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB18PQ96TA0 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB18PQ96TA0 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PCDHB18PQ96TA0 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB18PQ96TA0 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB18PQ96TA0 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
PCDHB18PQ96TA0 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB18PQ96TA0 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB18PQ96TA0 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDHB18PQ96TA0 AC091390.4-202ENST00000476426 537 ntBASIC20.21■□□□□ 0.83
PCDHB18PQ96TA0 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
PCDHB18PQ96TA0 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB18PQ96TA0 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB18PQ96TA0 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB18PQ96TA0 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.21■□□□□ 0.83
PCDHB18PQ96TA0 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB18PQ96TA0 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB18PQ96TA0 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDHB18PQ96TA0 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PCDHB18PQ96TA0 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
PCDHB18PQ96TA0 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHB18PQ96TA0 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.2■□□□□ 0.82
PCDHB18PQ96TA0 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHB18PQ96TA0 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHB18PQ96TA0 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHB18PQ96TA0 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PCDHB18PQ96TA0 AC104581.1-202ENST00000635932 2618 ntBASIC20.2■□□□□ 0.82
PCDHB18PQ96TA0 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
PCDHB18PQ96TA0 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHB18PQ96TA0 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
PCDHB18PQ96TA0 KSR1P1-201ENST00000446298 240 ntBASIC20.2■□□□□ 0.82
PCDHB18PQ96TA0 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
PCDHB18PQ96TA0 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.2■□□□□ 0.82
PCDHB18PQ96TA0 AF186192.3-201ENST00000583427 947 ntBASIC20.2■□□□□ 0.82
PCDHB18PQ96TA0 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PCDHB18PQ96TA0 AC083906.6-201ENST00000641366 219 ntBASIC20.2■□□□□ 0.82
PCDHB18PQ96TA0 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHB18PQ96TA0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.2■□□□□ 0.82
PCDHB18PQ96TA0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHB18PQ96TA0 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHB18PQ96TA0 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.2■□□□□ 0.82
PCDHB18PQ96TA0 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB18PQ96TA0 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB18PQ96TA0 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB18PQ96TA0 Z98044.1-201ENST00000632503 1764 ntBASIC20.19■□□□□ 0.82
PCDHB18PQ96TA0 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB18PQ96TA0 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms