Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
ZNF48Q96MX3 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.07
ZNF48Q96MX3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF48Q96MX3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC15.51■□□□□ 0.07
ZNF48Q96MX3 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC15.51■□□□□ 0.07
ZNF48Q96MX3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF48Q96MX3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF48Q96MX3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC15.51■□□□□ 0.07
ZNF48Q96MX3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
ZNF48Q96MX3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
ZNF48Q96MX3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC15.51■□□□□ 0.07
ZNF48Q96MX3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
ZNF48Q96MX3 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF48Q96MX3 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC15.51■□□□□ 0.07
ZNF48Q96MX3 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF48Q96MX3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF48Q96MX3 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.51■□□□□ 0.07
ZNF48Q96MX3 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.51■□□□□ 0.07
ZNF48Q96MX3 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF48Q96MX3 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF48Q96MX3 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF48Q96MX3 TSPY5P-201ENST00000426936 936 ntBASIC15.51■□□□□ 0.07
ZNF48Q96MX3 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.51■□□□□ 0.07
ZNF48Q96MX3 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.51■□□□□ 0.07
ZNF48Q96MX3 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF48Q96MX3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
ZNF48Q96MX3 COX11P1-201ENST00000489116 835 ntBASIC15.51■□□□□ 0.07
ZNF48Q96MX3 LINC01238-205ENST00000567549 1107 ntBASIC15.51■□□□□ 0.07
ZNF48Q96MX3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF48Q96MX3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC15.51■□□□□ 0.07
ZNF48Q96MX3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
ZNF48Q96MX3 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF48Q96MX3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
ZNF48Q96MX3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC15.51■□□□□ 0.07
ZNF48Q96MX3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF48Q96MX3 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF48Q96MX3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF48Q96MX3 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF48Q96MX3 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
ZNF48Q96MX3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC15.51■□□□□ 0.07
ZNF48Q96MX3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF48Q96MX3 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF48Q96MX3 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
ZNF48Q96MX3 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF48Q96MX3 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF48Q96MX3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
ZNF48Q96MX3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF48Q96MX3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF48Q96MX3 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF48Q96MX3 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF48Q96MX3 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
ZNF48Q96MX3 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF48Q96MX3 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.5■□□□□ 0.07
ZNF48Q96MX3 SAPCD2P2-201ENST00000431719 1174 ntBASIC15.5■□□□□ 0.07
ZNF48Q96MX3 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.5■□□□□ 0.07
ZNF48Q96MX3 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.5■□□□□ 0.07
ZNF48Q96MX3 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
ZNF48Q96MX3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.5■□□□□ 0.07
ZNF48Q96MX3 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF48Q96MX3 CKBP1-201ENST00000565489 1086 ntBASIC15.5■□□□□ 0.07
ZNF48Q96MX3 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15.5■□□□□ 0.07
ZNF48Q96MX3 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.5■□□□□ 0.07
ZNF48Q96MX3 AC011558.1-201ENST00000623459 338 ntBASIC15.5■□□□□ 0.07
ZNF48Q96MX3 AL358472.4-201ENST00000633140 710 ntBASIC15.5■□□□□ 0.07
ZNF48Q96MX3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.5■□□□□ 0.07
ZNF48Q96MX3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
ZNF48Q96MX3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF48Q96MX3 MED25-212ENST00000618715 1467 ntTSL 5 BASIC15.5■□□□□ 0.07
ZNF48Q96MX3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF48Q96MX3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF48Q96MX3 PCDHAC2-203ENST00000615316 3011 ntBASIC15.5■□□□□ 0.07
ZNF48Q96MX3 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF48Q96MX3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC15.5■□□□□ 0.07
ZNF48Q96MX3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.5■□□□□ 0.07
ZNF48Q96MX3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF48Q96MX3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF48Q96MX3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC15.5■□□□□ 0.07
ZNF48Q96MX3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF48Q96MX3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF48Q96MX3 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC15.49■□□□□ 0.07
ZNF48Q96MX3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC15.49■□□□□ 0.07
ZNF48Q96MX3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
ZNF48Q96MX3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF48Q96MX3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC15.49■□□□□ 0.07
ZNF48Q96MX3 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF48Q96MX3 AL031133.1-201ENST00000406807 723 ntBASIC15.49■□□□□ 0.07
ZNF48Q96MX3 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.49■□□□□ 0.07
ZNF48Q96MX3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC15.49■□□□□ 0.07
ZNF48Q96MX3 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.49■□□□□ 0.07
ZNF48Q96MX3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.49■□□□□ 0.07
ZNF48Q96MX3 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.49■□□□□ 0.07
ZNF48Q96MX3 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC15.49■□□□□ 0.07
ZNF48Q96MX3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF48Q96MX3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC15.49■□□□□ 0.07
ZNF48Q96MX3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
ZNF48Q96MX3 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC15.49■□□□□ 0.07
ZNF48Q96MX3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC15.49■□□□□ 0.07
ZNF48Q96MX3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF48Q96MX3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF48Q96MX3 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms