Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
LINC00479Q96M42 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00479Q96M42 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC14.58□□□□□ -0.08
LINC00479Q96M42 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC00479Q96M42 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC00479Q96M42 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00479Q96M42 ANO7L1-203ENST00000602586 1720 ntBASIC14.58□□□□□ -0.08
LINC00479Q96M42 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00479Q96M42 AC068338.2-201ENST00000563278 1430 ntBASIC14.58□□□□□ -0.08
LINC00479Q96M42 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00479Q96M42 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC00479Q96M42 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00479Q96M42 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC00479Q96M42 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00479Q96M42 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00479Q96M42 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00479Q96M42 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00479Q96M42 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00479Q96M42 ABALON-201ENST00000629058 1903 ntBASIC14.57□□□□□ -0.08
LINC00479Q96M42 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
LINC00479Q96M42 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC14.57□□□□□ -0.08
LINC00479Q96M42 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00479Q96M42 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00479Q96M42 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC14.57□□□□□ -0.08
LINC00479Q96M42 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
LINC00479Q96M42 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00479Q96M42 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC00479Q96M42 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC14.57□□□□□ -0.08
LINC00479Q96M42 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LINC00479Q96M42 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC00479Q96M42 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC00479Q96M42 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00479Q96M42 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
LINC00479Q96M42 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00479Q96M42 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00479Q96M42 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00479Q96M42 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00479Q96M42 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00479Q96M42 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00479Q96M42 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00479Q96M42 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00479Q96M42 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC14.57□□□□□ -0.08
LINC00479Q96M42 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00479Q96M42 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC14.56□□□□□ -0.08
LINC00479Q96M42 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
LINC00479Q96M42 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
LINC00479Q96M42 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
LINC00479Q96M42 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00479Q96M42 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
LINC00479Q96M42 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00479Q96M42 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00479Q96M42 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00479Q96M42 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00479Q96M42 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00479Q96M42 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00479Q96M42 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00479Q96M42 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00479Q96M42 CALM3-202ENST00000391918 702 ntTSL 2 BASIC14.56□□□□□ -0.08
LINC00479Q96M42 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
LINC00479Q96M42 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00479Q96M42 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00479Q96M42 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC14.56□□□□□ -0.08
LINC00479Q96M42 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC14.56□□□□□ -0.08
LINC00479Q96M42 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
LINC00479Q96M42 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.56□□□□□ -0.08
LINC00479Q96M42 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
LINC00479Q96M42 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC14.56□□□□□ -0.08
LINC00479Q96M42 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00479Q96M42 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC14.56□□□□□ -0.08
LINC00479Q96M42 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00479Q96M42 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00479Q96M42 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC14.56□□□□□ -0.08
LINC00479Q96M42 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC14.56□□□□□ -0.08
LINC00479Q96M42 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00479Q96M42 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00479Q96M42 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00479Q96M42 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00479Q96M42 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00479Q96M42 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00479Q96M42 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00479Q96M42 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
LINC00479Q96M42 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC14.55□□□□□ -0.08
LINC00479Q96M42 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC14.55□□□□□ -0.08
LINC00479Q96M42 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00479Q96M42 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
LINC00479Q96M42 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC14.55□□□□□ -0.08
LINC00479Q96M42 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00479Q96M42 UBQLN4P1-201ENST00000461599 1801 ntBASIC14.55□□□□□ -0.08
LINC00479Q96M42 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC14.55□□□□□ -0.08
LINC00479Q96M42 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00479Q96M42 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00479Q96M42 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00479Q96M42 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00479Q96M42 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00479Q96M42 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
LINC00479Q96M42 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
LINC00479Q96M42 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC14.55□□□□□ -0.08
LINC00479Q96M42 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC14.55□□□□□ -0.08
LINC00479Q96M42 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC14.55□□□□□ -0.08
LINC00479Q96M42 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms