Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ALPK3Q96L96 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ALPK3Q96L96 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
ALPK3Q96L96 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ALPK3Q96L96 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ALPK3Q96L96 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC20.82■□□□□ 0.92
ALPK3Q96L96 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.82■□□□□ 0.92
ALPK3Q96L96 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ALPK3Q96L96 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ALPK3Q96L96 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ALPK3Q96L96 PMS2P7-201ENST00000506558 1336 ntBASIC20.82■□□□□ 0.92
ALPK3Q96L96 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ALPK3Q96L96 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.82■□□□□ 0.92
ALPK3Q96L96 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.82■□□□□ 0.92
ALPK3Q96L96 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ALPK3Q96L96 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.82■□□□□ 0.92
ALPK3Q96L96 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ALPK3Q96L96 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ALPK3Q96L96 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.82■□□□□ 0.92
ALPK3Q96L96 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ALPK3Q96L96 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ALPK3Q96L96 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ALPK3Q96L96 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.82■□□□□ 0.92
ALPK3Q96L96 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.82■□□□□ 0.92
ALPK3Q96L96 MIR3180-5-201ENST00000583743 153 ntBASIC20.82■□□□□ 0.92
ALPK3Q96L96 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ALPK3Q96L96 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.82■□□□□ 0.92
ALPK3Q96L96 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ALPK3Q96L96 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ALPK3Q96L96 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ALPK3Q96L96 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.81■□□□□ 0.92
ALPK3Q96L96 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.81■□□□□ 0.92
ALPK3Q96L96 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.81■□□□□ 0.92
ALPK3Q96L96 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ALPK3Q96L96 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ALPK3Q96L96 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ALPK3Q96L96 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
ALPK3Q96L96 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
ALPK3Q96L96 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.81■□□□□ 0.92
ALPK3Q96L96 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.81■□□□□ 0.92
ALPK3Q96L96 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.81■□□□□ 0.92
ALPK3Q96L96 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
ALPK3Q96L96 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.81■□□□□ 0.92
ALPK3Q96L96 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ALPK3Q96L96 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.81■□□□□ 0.92
ALPK3Q96L96 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
ALPK3Q96L96 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.81■□□□□ 0.92
ALPK3Q96L96 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ALPK3Q96L96 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
ALPK3Q96L96 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.81■□□□□ 0.92
ALPK3Q96L96 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ALPK3Q96L96 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.8■□□□□ 0.92
ALPK3Q96L96 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.8■□□□□ 0.92
ALPK3Q96L96 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ALPK3Q96L96 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.8■□□□□ 0.92
ALPK3Q96L96 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.8■□□□□ 0.92
ALPK3Q96L96 CFL1-212ENST00000531413 636 ntTSL 3 BASIC20.8■□□□□ 0.92
ALPK3Q96L96 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.8■□□□□ 0.92
ALPK3Q96L96 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ALPK3Q96L96 AC027796.2-201ENST00000575326 344 ntBASIC20.8■□□□□ 0.92
ALPK3Q96L96 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ALPK3Q96L96 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ALPK3Q96L96 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.8■□□□□ 0.92
ALPK3Q96L96 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ALPK3Q96L96 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.8■□□□□ 0.92
ALPK3Q96L96 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
ALPK3Q96L96 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ALPK3Q96L96 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ALPK3Q96L96 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
ALPK3Q96L96 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
ALPK3Q96L96 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
ALPK3Q96L96 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.8■□□□□ 0.92
ALPK3Q96L96 AC008608.2-201ENST00000606089 416 ntBASIC20.8■□□□□ 0.92
ALPK3Q96L96 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
ALPK3Q96L96 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ALPK3Q96L96 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALPK3Q96L96 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALPK3Q96L96 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALPK3Q96L96 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALPK3Q96L96 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALPK3Q96L96 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALPK3Q96L96 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALPK3Q96L96 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
ALPK3Q96L96 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ALPK3Q96L96 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALPK3Q96L96 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ALPK3Q96L96 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALPK3Q96L96 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.79■□□□□ 0.92
ALPK3Q96L96 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALPK3Q96L96 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.79■□□□□ 0.92
ALPK3Q96L96 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALPK3Q96L96 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALPK3Q96L96 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ALPK3Q96L96 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALPK3Q96L96 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ALPK3Q96L96 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALPK3Q96L96 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALPK3Q96L96 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
ALPK3Q96L96 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ALPK3Q96L96 KRT18P23-201ENST00000435622 1283 ntBASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms