Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.48■□□□□ 0.71
RTP4Q96DX8 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
RTP4Q96DX8 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.47■□□□□ 0.71
RTP4Q96DX8 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.47■□□□□ 0.71
RTP4Q96DX8 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RTP4Q96DX8 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTP4Q96DX8 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.47■□□□□ 0.71
RTP4Q96DX8 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RTP4Q96DX8 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.47■□□□□ 0.71
RTP4Q96DX8 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTP4Q96DX8 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RTP4Q96DX8 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTP4Q96DX8 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
RTP4Q96DX8 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.47■□□□□ 0.71
RTP4Q96DX8 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.47■□□□□ 0.71
RTP4Q96DX8 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RTP4Q96DX8 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
RTP4Q96DX8 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.47■□□□□ 0.71
RTP4Q96DX8 WIZP1-201ENST00000531444 2299 ntBASIC19.46■□□□□ 0.71
RTP4Q96DX8 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.46■□□□□ 0.71
RTP4Q96DX8 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RTP4Q96DX8 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RTP4Q96DX8 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.46■□□□□ 0.71
RTP4Q96DX8 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTP4Q96DX8 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RTP4Q96DX8 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
RTP4Q96DX8 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTP4Q96DX8 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTP4Q96DX8 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTP4Q96DX8 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.46■□□□□ 0.71
RTP4Q96DX8 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
RTP4Q96DX8 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTP4Q96DX8 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.46■□□□□ 0.71
RTP4Q96DX8 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RTP4Q96DX8 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.46■□□□□ 0.71
RTP4Q96DX8 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.46■□□□□ 0.71
RTP4Q96DX8 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.46■□□□□ 0.71
RTP4Q96DX8 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTP4Q96DX8 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.46■□□□□ 0.71
RTP4Q96DX8 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.46■□□□□ 0.71
RTP4Q96DX8 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
RTP4Q96DX8 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.46■□□□□ 0.71
RTP4Q96DX8 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.46■□□□□ 0.71
RTP4Q96DX8 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.46■□□□□ 0.71
RTP4Q96DX8 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.46■□□□□ 0.71
RTP4Q96DX8 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RTP4Q96DX8 AC110285.5-201ENST00000611501 352 ntBASIC19.46■□□□□ 0.71
RTP4Q96DX8 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTP4Q96DX8 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTP4Q96DX8 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTP4Q96DX8 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTP4Q96DX8 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.46■□□□□ 0.71
RTP4Q96DX8 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTP4Q96DX8 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.46■□□□□ 0.71
RTP4Q96DX8 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RTP4Q96DX8 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTP4Q96DX8 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.46■□□□□ 0.71
RTP4Q96DX8 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RTP4Q96DX8 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RTP4Q96DX8 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RTP4Q96DX8 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTP4Q96DX8 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
RTP4Q96DX8 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTP4Q96DX8 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTP4Q96DX8 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTP4Q96DX8 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.45■□□□□ 0.7
RTP4Q96DX8 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTP4Q96DX8 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTP4Q96DX8 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTP4Q96DX8 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTP4Q96DX8 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTP4Q96DX8 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.45■□□□□ 0.7
RTP4Q96DX8 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTP4Q96DX8 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.45■□□□□ 0.7
RTP4Q96DX8 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RTP4Q96DX8 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.45■□□□□ 0.7
RTP4Q96DX8 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTP4Q96DX8 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTP4Q96DX8 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTP4Q96DX8 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTP4Q96DX8 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RTP4Q96DX8 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTP4Q96DX8 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTP4Q96DX8 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
RTP4Q96DX8 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTP4Q96DX8 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTP4Q96DX8 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTP4Q96DX8 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.45■□□□□ 0.7
RTP4Q96DX8 AC009113.1-201ENST00000570267 2443 ntBASIC19.44■□□□□ 0.7
RTP4Q96DX8 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTP4Q96DX8 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.44■□□□□ 0.7
RTP4Q96DX8 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTP4Q96DX8 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTP4Q96DX8 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTP4Q96DX8 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTP4Q96DX8 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.44■□□□□ 0.7
RTP4Q96DX8 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.44■□□□□ 0.7
RTP4Q96DX8 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.44■□□□□ 0.7
RTP4Q96DX8 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.44■□□□□ 0.7
RTP4Q96DX8 AL353708.3-201ENST00000610272 989 ntBASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms