Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UBE2E3Q969T4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UBE2E3Q969T4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBE2E3Q969T4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UBE2E3Q969T4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UBE2E3Q969T4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBE2E3Q969T4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBE2E3Q969T4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
UBE2E3Q969T4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.35■□□□□ 0.53
UBE2E3Q969T4 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
UBE2E3Q969T4 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.35■□□□□ 0.53
UBE2E3Q969T4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UBE2E3Q969T4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
UBE2E3Q969T4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
UBE2E3Q969T4 CR392000.1-201ENST00000624770 1228 ntBASIC18.35■□□□□ 0.53
UBE2E3Q969T4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.35■□□□□ 0.53
UBE2E3Q969T4 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBE2E3Q969T4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
UBE2E3Q969T4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBE2E3Q969T4 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBE2E3Q969T4 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBE2E3Q969T4 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.35■□□□□ 0.53
UBE2E3Q969T4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.35■□□□□ 0.53
UBE2E3Q969T4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.34■□□□□ 0.53
UBE2E3Q969T4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBE2E3Q969T4 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBE2E3Q969T4 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
UBE2E3Q969T4 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.34■□□□□ 0.53
UBE2E3Q969T4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBE2E3Q969T4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBE2E3Q969T4 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.34■□□□□ 0.53
UBE2E3Q969T4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.34■□□□□ 0.53
UBE2E3Q969T4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBE2E3Q969T4 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBE2E3Q969T4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.34■□□□□ 0.53
UBE2E3Q969T4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBE2E3Q969T4 TSPY23P-201ENST00000440136 739 ntBASIC18.34■□□□□ 0.53
UBE2E3Q969T4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UBE2E3Q969T4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UBE2E3Q969T4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBE2E3Q969T4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.34■□□□□ 0.53
UBE2E3Q969T4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBE2E3Q969T4 AP001412.1-201ENST00000608405 714 ntBASIC18.34■□□□□ 0.53
UBE2E3Q969T4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.34■□□□□ 0.53
UBE2E3Q969T4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.34■□□□□ 0.53
UBE2E3Q969T4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UBE2E3Q969T4 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
UBE2E3Q969T4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.34■□□□□ 0.53
UBE2E3Q969T4 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBE2E3Q969T4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBE2E3Q969T4 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.34■□□□□ 0.53
UBE2E3Q969T4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
UBE2E3Q969T4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
UBE2E3Q969T4 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
UBE2E3Q969T4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.33■□□□□ 0.53
UBE2E3Q969T4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBE2E3Q969T4 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBE2E3Q969T4 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBE2E3Q969T4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.33■□□□□ 0.52
UBE2E3Q969T4 AC004951.3-201ENST00000418645 1148 ntBASIC18.33■□□□□ 0.52
UBE2E3Q969T4 GCSHP5-201ENST00000443090 522 ntBASIC18.33■□□□□ 0.52
UBE2E3Q969T4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
UBE2E3Q969T4 PRSS44-201ENST00000515154 1146 ntBASIC18.33■□□□□ 0.52
UBE2E3Q969T4 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
UBE2E3Q969T4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.33■□□□□ 0.52
UBE2E3Q969T4 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.33■□□□□ 0.52
UBE2E3Q969T4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
UBE2E3Q969T4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
UBE2E3Q969T4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBE2E3Q969T4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBE2E3Q969T4 AC098818.2-201ENST00000564925 2320 ntBASIC18.33■□□□□ 0.52
UBE2E3Q969T4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
UBE2E3Q969T4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.32■□□□□ 0.52
UBE2E3Q969T4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBE2E3Q969T4 TNXA-203ENST00000507684 2038 ntBASIC18.32■□□□□ 0.52
UBE2E3Q969T4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBE2E3Q969T4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBE2E3Q969T4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
UBE2E3Q969T4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBE2E3Q969T4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
UBE2E3Q969T4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBE2E3Q969T4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBE2E3Q969T4 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBE2E3Q969T4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBE2E3Q969T4 AL158047.1-201ENST00000445918 881 ntBASIC18.32■□□□□ 0.52
UBE2E3Q969T4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.32■□□□□ 0.52
UBE2E3Q969T4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.32■□□□□ 0.52
UBE2E3Q969T4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.32■□□□□ 0.52
UBE2E3Q969T4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBE2E3Q969T4 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
UBE2E3Q969T4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBE2E3Q969T4 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBE2E3Q969T4 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
UBE2E3Q969T4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBE2E3Q969T4 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
UBE2E3Q969T4 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.32■□□□□ 0.52
UBE2E3Q969T4 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBE2E3Q969T4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.32■□□□□ 0.52
UBE2E3Q969T4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBE2E3Q969T4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms