Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATL1Q8WXF7 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATL1Q8WXF7 KRT16P1-201ENST00000399124 1418 ntBASIC18.62■□□□□ 0.57
ATL1Q8WXF7 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.62■□□□□ 0.57
ATL1Q8WXF7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATL1Q8WXF7 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATL1Q8WXF7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
ATL1Q8WXF7 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ATL1Q8WXF7 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATL1Q8WXF7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATL1Q8WXF7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.62■□□□□ 0.57
ATL1Q8WXF7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATL1Q8WXF7 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.62■□□□□ 0.57
ATL1Q8WXF7 AL161938.1-201ENST00000569833 2180 ntBASIC18.62■□□□□ 0.57
ATL1Q8WXF7 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATL1Q8WXF7 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.62■□□□□ 0.57
ATL1Q8WXF7 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ATL1Q8WXF7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ATL1Q8WXF7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATL1Q8WXF7 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
ATL1Q8WXF7 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATL1Q8WXF7 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.61■□□□□ 0.57
ATL1Q8WXF7 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.61■□□□□ 0.57
ATL1Q8WXF7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATL1Q8WXF7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
ATL1Q8WXF7 HCG11-201ENST00000411553 5696 ntBASIC18.61■□□□□ 0.57
ATL1Q8WXF7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
ATL1Q8WXF7 FEM1AP3-201ENST00000403722 1741 ntBASIC18.61■□□□□ 0.57
ATL1Q8WXF7 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATL1Q8WXF7 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATL1Q8WXF7 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATL1Q8WXF7 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.61■□□□□ 0.57
ATL1Q8WXF7 AC004980.1-204ENST00000429707 299 ntBASIC18.61■□□□□ 0.57
ATL1Q8WXF7 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ATL1Q8WXF7 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.61■□□□□ 0.57
ATL1Q8WXF7 GCSHP5-201ENST00000443090 522 ntBASIC18.61■□□□□ 0.57
ATL1Q8WXF7 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.61■□□□□ 0.57
ATL1Q8WXF7 Z85996.1-201ENST00000494644 937 ntBASIC18.61■□□□□ 0.57
ATL1Q8WXF7 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
ATL1Q8WXF7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.61■□□□□ 0.57
ATL1Q8WXF7 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.61■□□□□ 0.57
ATL1Q8WXF7 AC026271.3-201ENST00000571884 352 ntBASIC18.61■□□□□ 0.57
ATL1Q8WXF7 AL031985.4-201ENST00000642138 673 ntBASIC18.61■□□□□ 0.57
ATL1Q8WXF7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATL1Q8WXF7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATL1Q8WXF7 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
ATL1Q8WXF7 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATL1Q8WXF7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATL1Q8WXF7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.61■□□□□ 0.57
ATL1Q8WXF7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATL1Q8WXF7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.61■□□□□ 0.57
ATL1Q8WXF7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATL1Q8WXF7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATL1Q8WXF7 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.61■□□□□ 0.57
ATL1Q8WXF7 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.61■□□□□ 0.57
ATL1Q8WXF7 IRX1P1-201ENST00000438849 1838 ntBASIC18.6■□□□□ 0.57
ATL1Q8WXF7 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.6■□□□□ 0.57
ATL1Q8WXF7 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.6■□□□□ 0.57
ATL1Q8WXF7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
ATL1Q8WXF7 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATL1Q8WXF7 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.6■□□□□ 0.57
ATL1Q8WXF7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATL1Q8WXF7 KRT8P41-201ENST00000533985 1514 ntBASIC18.6■□□□□ 0.57
ATL1Q8WXF7 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.6■□□□□ 0.57
ATL1Q8WXF7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATL1Q8WXF7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
ATL1Q8WXF7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATL1Q8WXF7 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
ATL1Q8WXF7 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ATL1Q8WXF7 ABHD17AP1-201ENST00000358206 933 ntBASIC18.6■□□□□ 0.57
ATL1Q8WXF7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.6■□□□□ 0.57
ATL1Q8WXF7 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.6■□□□□ 0.57
ATL1Q8WXF7 RPS2P4-201ENST00000476944 856 ntBASIC18.6■□□□□ 0.57
ATL1Q8WXF7 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATL1Q8WXF7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.6■□□□□ 0.57
ATL1Q8WXF7 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.6■□□□□ 0.57
ATL1Q8WXF7 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATL1Q8WXF7 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.6■□□□□ 0.57
ATL1Q8WXF7 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.6■□□□□ 0.57
ATL1Q8WXF7 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ATL1Q8WXF7 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATL1Q8WXF7 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.6■□□□□ 0.57
ATL1Q8WXF7 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATL1Q8WXF7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.6■□□□□ 0.57
ATL1Q8WXF7 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ATL1Q8WXF7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
ATL1Q8WXF7 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATL1Q8WXF7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
ATL1Q8WXF7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ATL1Q8WXF7 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.6■□□□□ 0.57
ATL1Q8WXF7 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATL1Q8WXF7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATL1Q8WXF7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ATL1Q8WXF7 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATL1Q8WXF7 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATL1Q8WXF7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATL1Q8WXF7 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.59■□□□□ 0.57
ATL1Q8WXF7 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
ATL1Q8WXF7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATL1Q8WXF7 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms