Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTCD2Q8WV60 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTCD2Q8WV60 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PTCD2Q8WV60 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.31■□□□□ 0.68
PTCD2Q8WV60 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PTCD2Q8WV60 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.31■□□□□ 0.68
PTCD2Q8WV60 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTCD2Q8WV60 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PTCD2Q8WV60 IRX1P1-201ENST00000438849 1838 ntBASIC19.31■□□□□ 0.68
PTCD2Q8WV60 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTCD2Q8WV60 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.31■□□□□ 0.68
PTCD2Q8WV60 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PTCD2Q8WV60 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTCD2Q8WV60 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.31■□□□□ 0.68
PTCD2Q8WV60 TSPY21P-201ENST00000433481 731 ntBASIC19.31■□□□□ 0.68
PTCD2Q8WV60 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.31■□□□□ 0.68
PTCD2Q8WV60 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.31■□□□□ 0.68
PTCD2Q8WV60 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.31■□□□□ 0.68
PTCD2Q8WV60 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.31■□□□□ 0.68
PTCD2Q8WV60 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PTCD2Q8WV60 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PTCD2Q8WV60 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.31■□□□□ 0.68
PTCD2Q8WV60 AL160286.2-201ENST00000567150 934 ntBASIC19.31■□□□□ 0.68
PTCD2Q8WV60 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PTCD2Q8WV60 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.31■□□□□ 0.68
PTCD2Q8WV60 AL353708.3-201ENST00000610272 989 ntBASIC19.31■□□□□ 0.68
PTCD2Q8WV60 AP001002.2-201ENST00000625137 386 ntBASIC19.31■□□□□ 0.68
PTCD2Q8WV60 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTCD2Q8WV60 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTCD2Q8WV60 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTCD2Q8WV60 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PTCD2Q8WV60 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PTCD2Q8WV60 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTCD2Q8WV60 FEM1AP3-201ENST00000403722 1741 ntBASIC19.31■□□□□ 0.68
PTCD2Q8WV60 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.31■□□□□ 0.68
PTCD2Q8WV60 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PTCD2Q8WV60 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PTCD2Q8WV60 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PTCD2Q8WV60 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.3■□□□□ 0.68
PTCD2Q8WV60 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.3■□□□□ 0.68
PTCD2Q8WV60 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTCD2Q8WV60 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTCD2Q8WV60 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PTCD2Q8WV60 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTCD2Q8WV60 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.3■□□□□ 0.68
PTCD2Q8WV60 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
PTCD2Q8WV60 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
PTCD2Q8WV60 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.3■□□□□ 0.68
PTCD2Q8WV60 NIFKP9-201ENST00000419265 221 ntBASIC19.3■□□□□ 0.68
PTCD2Q8WV60 AL353807.1-201ENST00000427475 662 ntBASIC19.3■□□□□ 0.68
PTCD2Q8WV60 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.3■□□□□ 0.68
PTCD2Q8WV60 AP003071.4-201ENST00000562276 1284 ntBASIC19.3■□□□□ 0.68
PTCD2Q8WV60 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.3■□□□□ 0.68
PTCD2Q8WV60 MIR4785-201ENST00000585005 73 ntBASIC19.3■□□□□ 0.68
PTCD2Q8WV60 CR392000.1-201ENST00000624770 1228 ntBASIC19.3■□□□□ 0.68
PTCD2Q8WV60 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.3■□□□□ 0.68
PTCD2Q8WV60 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.3■□□□□ 0.68
PTCD2Q8WV60 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTCD2Q8WV60 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTCD2Q8WV60 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
PTCD2Q8WV60 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTCD2Q8WV60 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
PTCD2Q8WV60 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.3■□□□□ 0.68
PTCD2Q8WV60 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTCD2Q8WV60 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTCD2Q8WV60 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTCD2Q8WV60 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PTCD2Q8WV60 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTCD2Q8WV60 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTCD2Q8WV60 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTCD2Q8WV60 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
PTCD2Q8WV60 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTCD2Q8WV60 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PTCD2Q8WV60 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PTCD2Q8WV60 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.29■□□□□ 0.68
PTCD2Q8WV60 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.29■□□□□ 0.68
PTCD2Q8WV60 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.29■□□□□ 0.68
PTCD2Q8WV60 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.29■□□□□ 0.68
PTCD2Q8WV60 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.29■□□□□ 0.68
PTCD2Q8WV60 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.29■□□□□ 0.68
PTCD2Q8WV60 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PTCD2Q8WV60 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
PTCD2Q8WV60 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.29■□□□□ 0.68
PTCD2Q8WV60 AL020996.1-203ENST00000536896 2307 ntBASIC19.29■□□□□ 0.68
PTCD2Q8WV60 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PTCD2Q8WV60 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
PTCD2Q8WV60 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTCD2Q8WV60 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTCD2Q8WV60 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PTCD2Q8WV60 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTCD2Q8WV60 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTCD2Q8WV60 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
PTCD2Q8WV60 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTCD2Q8WV60 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.28■□□□□ 0.68
PTCD2Q8WV60 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.28■□□□□ 0.68
PTCD2Q8WV60 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTCD2Q8WV60 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTCD2Q8WV60 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTCD2Q8WV60 BX088651.1-201ENST00000540551 451 ntBASIC19.28■□□□□ 0.68
PTCD2Q8WV60 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms