Protein–RNA interactions for Protein: Q8WUY9

DEPDC1B, DEP domain-containing protein 1B, humanhuman

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1BQ8WUY9 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DEPDC1BQ8WUY9 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.19■□□□□ 0.82
DEPDC1BQ8WUY9 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DEPDC1BQ8WUY9 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.19■□□□□ 0.82
DEPDC1BQ8WUY9 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DEPDC1BQ8WUY9 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
DEPDC1BQ8WUY9 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DEPDC1BQ8WUY9 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DEPDC1BQ8WUY9 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
DEPDC1BQ8WUY9 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DEPDC1BQ8WUY9 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DEPDC1BQ8WUY9 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.18■□□□□ 0.82
DEPDC1BQ8WUY9 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
DEPDC1BQ8WUY9 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DEPDC1BQ8WUY9 FAM207BP-201ENST00000447172 505 ntBASIC20.18■□□□□ 0.82
DEPDC1BQ8WUY9 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.18■□□□□ 0.82
DEPDC1BQ8WUY9 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.18■□□□□ 0.82
DEPDC1BQ8WUY9 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
DEPDC1BQ8WUY9 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
DEPDC1BQ8WUY9 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.18■□□□□ 0.82
DEPDC1BQ8WUY9 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DEPDC1BQ8WUY9 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.18■□□□□ 0.82
DEPDC1BQ8WUY9 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DEPDC1BQ8WUY9 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
DEPDC1BQ8WUY9 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
DEPDC1BQ8WUY9 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
DEPDC1BQ8WUY9 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DEPDC1BQ8WUY9 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
DEPDC1BQ8WUY9 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
DEPDC1BQ8WUY9 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.17■□□□□ 0.82
DEPDC1BQ8WUY9 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
DEPDC1BQ8WUY9 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DEPDC1BQ8WUY9 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
DEPDC1BQ8WUY9 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.17■□□□□ 0.82
DEPDC1BQ8WUY9 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
DEPDC1BQ8WUY9 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
DEPDC1BQ8WUY9 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.17■□□□□ 0.82
DEPDC1BQ8WUY9 MFAP1P1-201ENST00000442257 1255 ntBASIC20.17■□□□□ 0.82
DEPDC1BQ8WUY9 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.17■□□□□ 0.82
DEPDC1BQ8WUY9 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
DEPDC1BQ8WUY9 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.17■□□□□ 0.82
DEPDC1BQ8WUY9 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.17■□□□□ 0.82
DEPDC1BQ8WUY9 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
DEPDC1BQ8WUY9 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DEPDC1BQ8WUY9 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
DEPDC1BQ8WUY9 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
DEPDC1BQ8WUY9 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.17■□□□□ 0.82
DEPDC1BQ8WUY9 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.17■□□□□ 0.82
DEPDC1BQ8WUY9 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
DEPDC1BQ8WUY9 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
DEPDC1BQ8WUY9 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
DEPDC1BQ8WUY9 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DEPDC1BQ8WUY9 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DEPDC1BQ8WUY9 AC087289.5-201ENST00000586076 3175 ntBASIC20.16■□□□□ 0.82
DEPDC1BQ8WUY9 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DEPDC1BQ8WUY9 TREX1-205ENST00000625293 1783 ntBASIC20.16■□□□□ 0.82
DEPDC1BQ8WUY9 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DEPDC1BQ8WUY9 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.16■□□□□ 0.82
DEPDC1BQ8WUY9 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DEPDC1BQ8WUY9 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
DEPDC1BQ8WUY9 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DEPDC1BQ8WUY9 INGX-201ENST00000359239 846 ntBASIC20.16■□□□□ 0.82
DEPDC1BQ8WUY9 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DEPDC1BQ8WUY9 SLC25A1P2-201ENST00000430693 912 ntBASIC20.16■□□□□ 0.82
DEPDC1BQ8WUY9 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.16■□□□□ 0.82
DEPDC1BQ8WUY9 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.16■□□□□ 0.82
DEPDC1BQ8WUY9 AC022616.7-201ENST00000525383 220 ntBASIC20.16■□□□□ 0.82
DEPDC1BQ8WUY9 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.16■□□□□ 0.82
DEPDC1BQ8WUY9 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DEPDC1BQ8WUY9 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DEPDC1BQ8WUY9 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.16■□□□□ 0.82
DEPDC1BQ8WUY9 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DEPDC1BQ8WUY9 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DEPDC1BQ8WUY9 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
DEPDC1BQ8WUY9 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
DEPDC1BQ8WUY9 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
DEPDC1BQ8WUY9 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.16■□□□□ 0.82
DEPDC1BQ8WUY9 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
DEPDC1BQ8WUY9 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.16■□□□□ 0.82
DEPDC1BQ8WUY9 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
DEPDC1BQ8WUY9 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DEPDC1BQ8WUY9 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DEPDC1BQ8WUY9 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DEPDC1BQ8WUY9 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DEPDC1BQ8WUY9 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
DEPDC1BQ8WUY9 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.15■□□□□ 0.82
DEPDC1BQ8WUY9 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
DEPDC1BQ8WUY9 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.15■□□□□ 0.82
DEPDC1BQ8WUY9 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DEPDC1BQ8WUY9 AC008040.2-201ENST00000461049 708 ntBASIC20.15■□□□□ 0.82
DEPDC1BQ8WUY9 AC063952.2-201ENST00000498792 1227 ntBASIC20.15■□□□□ 0.82
DEPDC1BQ8WUY9 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.15■□□□□ 0.82
DEPDC1BQ8WUY9 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.15■□□□□ 0.82
DEPDC1BQ8WUY9 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
DEPDC1BQ8WUY9 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.15■□□□□ 0.82
DEPDC1BQ8WUY9 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
DEPDC1BQ8WUY9 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.15■□□□□ 0.82
DEPDC1BQ8WUY9 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DEPDC1BQ8WUY9 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DEPDC1BQ8WUY9 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms