Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
TMEM35BQ8NCS4 RCC2P6-201ENST00000526625 1557 ntBASIC20.22■□□□□ 0.83
TMEM35BQ8NCS4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM35BQ8NCS4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM35BQ8NCS4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.22■□□□□ 0.83
TMEM35BQ8NCS4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.22■□□□□ 0.83
TMEM35BQ8NCS4 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM35BQ8NCS4 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.22■□□□□ 0.83
TMEM35BQ8NCS4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM35BQ8NCS4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM35BQ8NCS4 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM35BQ8NCS4 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM35BQ8NCS4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM35BQ8NCS4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM35BQ8NCS4 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM35BQ8NCS4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM35BQ8NCS4 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM35BQ8NCS4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM35BQ8NCS4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM35BQ8NCS4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM35BQ8NCS4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
TMEM35BQ8NCS4 RPS2P55-201ENST00000397318 883 ntBASIC20.21■□□□□ 0.83
TMEM35BQ8NCS4 FAM197Y1-201ENST00000421178 764 ntBASIC20.21■□□□□ 0.83
TMEM35BQ8NCS4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.21■□□□□ 0.83
TMEM35BQ8NCS4 AC091390.4-202ENST00000476426 537 ntBASIC20.21■□□□□ 0.83
TMEM35BQ8NCS4 AC107956.1-201ENST00000494359 873 ntBASIC20.21■□□□□ 0.83
TMEM35BQ8NCS4 AP001412.1-201ENST00000608405 714 ntBASIC20.21■□□□□ 0.83
TMEM35BQ8NCS4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.21■□□□□ 0.83
TMEM35BQ8NCS4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM35BQ8NCS4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.21■□□□□ 0.83
TMEM35BQ8NCS4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM35BQ8NCS4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.21■□□□□ 0.83
TMEM35BQ8NCS4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM35BQ8NCS4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.21■□□□□ 0.83
TMEM35BQ8NCS4 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
TMEM35BQ8NCS4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TMEM35BQ8NCS4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM35BQ8NCS4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.2■□□□□ 0.82
TMEM35BQ8NCS4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM35BQ8NCS4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.2■□□□□ 0.82
TMEM35BQ8NCS4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.2■□□□□ 0.82
TMEM35BQ8NCS4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
TMEM35BQ8NCS4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM35BQ8NCS4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.2■□□□□ 0.82
TMEM35BQ8NCS4 AC012618.2-201ENST00000428058 849 ntBASIC20.2■□□□□ 0.82
TMEM35BQ8NCS4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM35BQ8NCS4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.2■□□□□ 0.82
TMEM35BQ8NCS4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.2■□□□□ 0.82
TMEM35BQ8NCS4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.2■□□□□ 0.82
TMEM35BQ8NCS4 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.2■□□□□ 0.82
TMEM35BQ8NCS4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
TMEM35BQ8NCS4 CD177P1-201ENST00000606252 935 ntBASIC20.2■□□□□ 0.82
TMEM35BQ8NCS4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.2■□□□□ 0.82
TMEM35BQ8NCS4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
TMEM35BQ8NCS4 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM35BQ8NCS4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM35BQ8NCS4 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM35BQ8NCS4 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM35BQ8NCS4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM35BQ8NCS4 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.2■□□□□ 0.82
TMEM35BQ8NCS4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM35BQ8NCS4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.2■□□□□ 0.82
TMEM35BQ8NCS4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM35BQ8NCS4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.19■□□□□ 0.82
TMEM35BQ8NCS4 KRT8P11-201ENST00000409686 1436 ntBASIC20.19■□□□□ 0.82
TMEM35BQ8NCS4 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
TMEM35BQ8NCS4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM35BQ8NCS4 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM35BQ8NCS4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.19■□□□□ 0.82
TMEM35BQ8NCS4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM35BQ8NCS4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM35BQ8NCS4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM35BQ8NCS4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM35BQ8NCS4 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.19■□□□□ 0.82
TMEM35BQ8NCS4 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM35BQ8NCS4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM35BQ8NCS4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
TMEM35BQ8NCS4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM35BQ8NCS4 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM35BQ8NCS4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.19■□□□□ 0.82
TMEM35BQ8NCS4 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.19■□□□□ 0.82
TMEM35BQ8NCS4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.19■□□□□ 0.82
TMEM35BQ8NCS4 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.19■□□□□ 0.82
TMEM35BQ8NCS4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM35BQ8NCS4 PRSS44-201ENST00000515154 1146 ntBASIC20.19■□□□□ 0.82
TMEM35BQ8NCS4 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM35BQ8NCS4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.19■□□□□ 0.82
TMEM35BQ8NCS4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.19■□□□□ 0.82
TMEM35BQ8NCS4 AC233702.5-201ENST00000584107 538 ntBASIC20.19■□□□□ 0.82
TMEM35BQ8NCS4 AC011298.2-201ENST00000617989 482 ntBASIC20.19■□□□□ 0.82
TMEM35BQ8NCS4 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
TMEM35BQ8NCS4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
TMEM35BQ8NCS4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.19■□□□□ 0.82
TMEM35BQ8NCS4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM35BQ8NCS4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.19■□□□□ 0.82
TMEM35BQ8NCS4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM35BQ8NCS4 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
TMEM35BQ8NCS4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TMEM35BQ8NCS4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM35BQ8NCS4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms