Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LINC01555Q8NAE3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LINC01555Q8NAE3 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.37■□□□□ 0.53
LINC01555Q8NAE3 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.37■□□□□ 0.53
LINC01555Q8NAE3 C2orf69P3-201ENST00000565542 1120 ntBASIC18.37■□□□□ 0.53
LINC01555Q8NAE3 AL023803.3-201ENST00000615559 522 ntBASIC18.37■□□□□ 0.53
LINC01555Q8NAE3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.37■□□□□ 0.53
LINC01555Q8NAE3 AC097493.4-201ENST00000641197 219 ntBASIC18.37■□□□□ 0.53
LINC01555Q8NAE3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LINC01555Q8NAE3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LINC01555Q8NAE3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LINC01555Q8NAE3 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.37■□□□□ 0.53
LINC01555Q8NAE3 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LINC01555Q8NAE3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LINC01555Q8NAE3 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LINC01555Q8NAE3 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
LINC01555Q8NAE3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.37■□□□□ 0.53
LINC01555Q8NAE3 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LINC01555Q8NAE3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.37■□□□□ 0.53
LINC01555Q8NAE3 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.37■□□□□ 0.53
LINC01555Q8NAE3 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LINC01555Q8NAE3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LINC01555Q8NAE3 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LINC01555Q8NAE3 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
LINC01555Q8NAE3 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.36■□□□□ 0.53
LINC01555Q8NAE3 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LINC01555Q8NAE3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LINC01555Q8NAE3 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
LINC01555Q8NAE3 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LINC01555Q8NAE3 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
LINC01555Q8NAE3 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LINC01555Q8NAE3 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.36■□□□□ 0.53
LINC01555Q8NAE3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.36■□□□□ 0.53
LINC01555Q8NAE3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.36■□□□□ 0.53
LINC01555Q8NAE3 CA15P1-201ENST00000481698 905 ntBASIC18.36■□□□□ 0.53
LINC01555Q8NAE3 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.36■□□□□ 0.53
LINC01555Q8NAE3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LINC01555Q8NAE3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.36■□□□□ 0.53
LINC01555Q8NAE3 EGLN1P1-201ENST00000531623 762 ntBASIC18.36■□□□□ 0.53
LINC01555Q8NAE3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.36■□□□□ 0.53
LINC01555Q8NAE3 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.36■□□□□ 0.53
LINC01555Q8NAE3 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
LINC01555Q8NAE3 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.36■□□□□ 0.53
LINC01555Q8NAE3 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LINC01555Q8NAE3 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LINC01555Q8NAE3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LINC01555Q8NAE3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LINC01555Q8NAE3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LINC01555Q8NAE3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LINC01555Q8NAE3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LINC01555Q8NAE3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LINC01555Q8NAE3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.35■□□□□ 0.53
LINC01555Q8NAE3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LINC01555Q8NAE3 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LINC01555Q8NAE3 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.35■□□□□ 0.53
LINC01555Q8NAE3 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
LINC01555Q8NAE3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LINC01555Q8NAE3 LINC01568-207ENST00000641790 1380 ntBASIC18.35■□□□□ 0.53
LINC01555Q8NAE3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
LINC01555Q8NAE3 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LINC01555Q8NAE3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LINC01555Q8NAE3 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.35■□□□□ 0.53
LINC01555Q8NAE3 SLC25A1P2-201ENST00000430693 912 ntBASIC18.35■□□□□ 0.53
LINC01555Q8NAE3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LINC01555Q8NAE3 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.35■□□□□ 0.53
LINC01555Q8NAE3 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LINC01555Q8NAE3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.35■□□□□ 0.53
LINC01555Q8NAE3 AC145285.6-201ENST00000604632 637 ntBASIC18.35■□□□□ 0.53
LINC01555Q8NAE3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LINC01555Q8NAE3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
LINC01555Q8NAE3 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LINC01555Q8NAE3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LINC01555Q8NAE3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
LINC01555Q8NAE3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
LINC01555Q8NAE3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
LINC01555Q8NAE3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LINC01555Q8NAE3 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
LINC01555Q8NAE3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
LINC01555Q8NAE3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
LINC01555Q8NAE3 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LINC01555Q8NAE3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LINC01555Q8NAE3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.34■□□□□ 0.53
LINC01555Q8NAE3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LINC01555Q8NAE3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.34■□□□□ 0.53
LINC01555Q8NAE3 ECEL1P3-201ENST00000427961 737 ntBASIC18.34■□□□□ 0.53
LINC01555Q8NAE3 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.34■□□□□ 0.53
LINC01555Q8NAE3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.34■□□□□ 0.53
LINC01555Q8NAE3 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.34■□□□□ 0.53
LINC01555Q8NAE3 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.34■□□□□ 0.53
LINC01555Q8NAE3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.34■□□□□ 0.53
LINC01555Q8NAE3 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LINC01555Q8NAE3 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
LINC01555Q8NAE3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LINC01555Q8NAE3 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
LINC01555Q8NAE3 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.34■□□□□ 0.53
LINC01555Q8NAE3 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
LINC01555Q8NAE3 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LINC01555Q8NAE3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LINC01555Q8NAE3 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LINC01555Q8NAE3 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms