Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC89Q8N998 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC89Q8N998 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CCDC89Q8N998 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CCDC89Q8N998 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC89Q8N998 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.79■□□□□ 0.76
CCDC89Q8N998 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC89Q8N998 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.79■□□□□ 0.76
CCDC89Q8N998 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.79■□□□□ 0.76
CCDC89Q8N998 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.79■□□□□ 0.76
CCDC89Q8N998 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC89Q8N998 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC89Q8N998 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC89Q8N998 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC89Q8N998 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC89Q8N998 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC89Q8N998 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC89Q8N998 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC89Q8N998 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC89Q8N998 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC89Q8N998 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC89Q8N998 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC89Q8N998 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC89Q8N998 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
CCDC89Q8N998 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC89Q8N998 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC89Q8N998 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC89Q8N998 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC89Q8N998 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC89Q8N998 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC89Q8N998 AC069152.1-201ENST00000438030 544 ntBASIC19.78■□□□□ 0.76
CCDC89Q8N998 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC89Q8N998 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC89Q8N998 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC89Q8N998 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.78■□□□□ 0.76
CCDC89Q8N998 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CCDC89Q8N998 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC89Q8N998 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CCDC89Q8N998 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC89Q8N998 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC89Q8N998 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC89Q8N998 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC89Q8N998 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC89Q8N998 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC89Q8N998 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC89Q8N998 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC89Q8N998 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC89Q8N998 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC89Q8N998 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC89Q8N998 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC89Q8N998 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC89Q8N998 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC89Q8N998 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC89Q8N998 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC89Q8N998 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC89Q8N998 WIZP1-201ENST00000531444 2299 ntBASIC19.77■□□□□ 0.76
CCDC89Q8N998 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.77■□□□□ 0.76
CCDC89Q8N998 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC89Q8N998 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC89Q8N998 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC89Q8N998 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC89Q8N998 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC89Q8N998 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC89Q8N998 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.77■□□□□ 0.76
CCDC89Q8N998 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC89Q8N998 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC89Q8N998 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.77■□□□□ 0.76
CCDC89Q8N998 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.77■□□□□ 0.76
CCDC89Q8N998 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC89Q8N998 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC89Q8N998 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CCDC89Q8N998 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CCDC89Q8N998 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC89Q8N998 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC89Q8N998 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC89Q8N998 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
CCDC89Q8N998 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC89Q8N998 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC89Q8N998 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC89Q8N998 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC89Q8N998 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC89Q8N998 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CCDC89Q8N998 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CCDC89Q8N998 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC89Q8N998 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC89Q8N998 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC89Q8N998 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CCDC89Q8N998 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC89Q8N998 AC090164.3-201ENST00000610780 2143 ntBASIC19.76■□□□□ 0.75
CCDC89Q8N998 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CCDC89Q8N998 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC89Q8N998 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC89Q8N998 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC89Q8N998 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC89Q8N998 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC89Q8N998 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
CCDC89Q8N998 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC89Q8N998 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC89Q8N998 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC89Q8N998 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms