Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB42Q8N4Z0 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB42Q8N4Z0 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.59■□□□□ 0.57
RAB42Q8N4Z0 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.59■□□□□ 0.57
RAB42Q8N4Z0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB42Q8N4Z0 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RAB42Q8N4Z0 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB42Q8N4Z0 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
RAB42Q8N4Z0 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAB42Q8N4Z0 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
RAB42Q8N4Z0 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
RAB42Q8N4Z0 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.59■□□□□ 0.57
RAB42Q8N4Z0 AC091390.4-202ENST00000476426 537 ntBASIC18.59■□□□□ 0.57
RAB42Q8N4Z0 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.59■□□□□ 0.57
RAB42Q8N4Z0 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAB42Q8N4Z0 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.59■□□□□ 0.57
RAB42Q8N4Z0 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.59■□□□□ 0.57
RAB42Q8N4Z0 REXO1L10P-201ENST00000615707 1290 ntBASIC18.59■□□□□ 0.57
RAB42Q8N4Z0 AC130371.2-201ENST00000619443 611 ntBASIC18.59■□□□□ 0.57
RAB42Q8N4Z0 REXO1L12P-201ENST00000622156 912 ntBASIC18.59■□□□□ 0.57
RAB42Q8N4Z0 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB42Q8N4Z0 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB42Q8N4Z0 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
RAB42Q8N4Z0 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAB42Q8N4Z0 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAB42Q8N4Z0 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.59■□□□□ 0.57
RAB42Q8N4Z0 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB42Q8N4Z0 KRT8P41-201ENST00000533985 1514 ntBASIC18.59■□□□□ 0.57
RAB42Q8N4Z0 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB42Q8N4Z0 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
RAB42Q8N4Z0 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.58■□□□□ 0.57
RAB42Q8N4Z0 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
RAB42Q8N4Z0 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RAB42Q8N4Z0 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.58■□□□□ 0.57
RAB42Q8N4Z0 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RAB42Q8N4Z0 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.58■□□□□ 0.57
RAB42Q8N4Z0 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB42Q8N4Z0 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
RAB42Q8N4Z0 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB42Q8N4Z0 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.58■□□□□ 0.56
RAB42Q8N4Z0 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.58■□□□□ 0.56
RAB42Q8N4Z0 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.58■□□□□ 0.56
RAB42Q8N4Z0 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RAB42Q8N4Z0 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RAB42Q8N4Z0 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
RAB42Q8N4Z0 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.58■□□□□ 0.56
RAB42Q8N4Z0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.58■□□□□ 0.56
RAB42Q8N4Z0 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RAB42Q8N4Z0 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.58■□□□□ 0.56
RAB42Q8N4Z0 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.58■□□□□ 0.56
RAB42Q8N4Z0 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.58■□□□□ 0.56
RAB42Q8N4Z0 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.58■□□□□ 0.56
RAB42Q8N4Z0 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB42Q8N4Z0 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
RAB42Q8N4Z0 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.58■□□□□ 0.56
RAB42Q8N4Z0 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.58■□□□□ 0.56
RAB42Q8N4Z0 AL032819.2-201ENST00000624543 2162 ntBASIC18.58■□□□□ 0.56
RAB42Q8N4Z0 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB42Q8N4Z0 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB42Q8N4Z0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB42Q8N4Z0 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB42Q8N4Z0 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
RAB42Q8N4Z0 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB42Q8N4Z0 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB42Q8N4Z0 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.57■□□□□ 0.56
RAB42Q8N4Z0 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.57■□□□□ 0.56
RAB42Q8N4Z0 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB42Q8N4Z0 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RAB42Q8N4Z0 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB42Q8N4Z0 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RAB42Q8N4Z0 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.57■□□□□ 0.56
RAB42Q8N4Z0 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAB42Q8N4Z0 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
RAB42Q8N4Z0 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
RAB42Q8N4Z0 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.57■□□□□ 0.56
RAB42Q8N4Z0 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.57■□□□□ 0.56
RAB42Q8N4Z0 AP000692.2-201ENST00000608391 879 ntBASIC18.57■□□□□ 0.56
RAB42Q8N4Z0 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RAB42Q8N4Z0 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB42Q8N4Z0 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.57■□□□□ 0.56
RAB42Q8N4Z0 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB42Q8N4Z0 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RAB42Q8N4Z0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
RAB42Q8N4Z0 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB42Q8N4Z0 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB42Q8N4Z0 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB42Q8N4Z0 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.56■□□□□ 0.56
RAB42Q8N4Z0 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.56■□□□□ 0.56
RAB42Q8N4Z0 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RAB42Q8N4Z0 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB42Q8N4Z0 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RAB42Q8N4Z0 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
RAB42Q8N4Z0 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.56■□□□□ 0.56
RAB42Q8N4Z0 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RAB42Q8N4Z0 AC011506.1-201ENST00000474329 610 ntBASIC18.56■□□□□ 0.56
RAB42Q8N4Z0 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.56■□□□□ 0.56
RAB42Q8N4Z0 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.56■□□□□ 0.56
RAB42Q8N4Z0 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RAB42Q8N4Z0 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB42Q8N4Z0 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms