Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC116Q8IYX3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC116Q8IYX3 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC116Q8IYX3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC116Q8IYX3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC116Q8IYX3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC116Q8IYX3 FP475955.4-201ENST00000623131 1990 ntBASIC17.99■□□□□ 0.47
CCDC116Q8IYX3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC116Q8IYX3 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
CCDC116Q8IYX3 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC116Q8IYX3 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC116Q8IYX3 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC116Q8IYX3 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC116Q8IYX3 AC004408.2-201ENST00000623613 2777 ntBASIC17.98■□□□□ 0.47
CCDC116Q8IYX3 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.98■□□□□ 0.47
CCDC116Q8IYX3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC116Q8IYX3 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
CCDC116Q8IYX3 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC116Q8IYX3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC116Q8IYX3 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC116Q8IYX3 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC116Q8IYX3 UBE2SP1-201ENST00000450587 669 ntBASIC17.98■□□□□ 0.47
CCDC116Q8IYX3 Z85996.1-201ENST00000494644 937 ntBASIC17.98■□□□□ 0.47
CCDC116Q8IYX3 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC116Q8IYX3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC116Q8IYX3 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC116Q8IYX3 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.98■□□□□ 0.47
CCDC116Q8IYX3 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC116Q8IYX3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC116Q8IYX3 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC116Q8IYX3 FEM1AP3-201ENST00000403722 1741 ntBASIC17.98■□□□□ 0.47
CCDC116Q8IYX3 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC116Q8IYX3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC116Q8IYX3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC116Q8IYX3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC116Q8IYX3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC116Q8IYX3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC116Q8IYX3 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC116Q8IYX3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC116Q8IYX3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC116Q8IYX3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC116Q8IYX3 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC116Q8IYX3 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC116Q8IYX3 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC116Q8IYX3 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CCDC116Q8IYX3 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.97■□□□□ 0.47
CCDC116Q8IYX3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
CCDC116Q8IYX3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC116Q8IYX3 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC116Q8IYX3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC116Q8IYX3 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CCDC116Q8IYX3 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC116Q8IYX3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC116Q8IYX3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC116Q8IYX3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC116Q8IYX3 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC116Q8IYX3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
CCDC116Q8IYX3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CCDC116Q8IYX3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC116Q8IYX3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC116Q8IYX3 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
CCDC116Q8IYX3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC116Q8IYX3 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC116Q8IYX3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC116Q8IYX3 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC116Q8IYX3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC116Q8IYX3 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC116Q8IYX3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CCDC116Q8IYX3 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
CCDC116Q8IYX3 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC116Q8IYX3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC116Q8IYX3 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CCDC116Q8IYX3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC116Q8IYX3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC116Q8IYX3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC116Q8IYX3 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CCDC116Q8IYX3 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC116Q8IYX3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CCDC116Q8IYX3 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC116Q8IYX3 TSPY21P-201ENST00000433481 731 ntBASIC17.96■□□□□ 0.47
CCDC116Q8IYX3 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.96■□□□□ 0.47
CCDC116Q8IYX3 AC073195.1-201ENST00000607241 877 ntBASIC17.96■□□□□ 0.47
CCDC116Q8IYX3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC116Q8IYX3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC116Q8IYX3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CCDC116Q8IYX3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC116Q8IYX3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC116Q8IYX3 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC116Q8IYX3 KRT16P1-201ENST00000399124 1418 ntBASIC17.96■□□□□ 0.47
CCDC116Q8IYX3 AC020763.4-201ENST00000623414 4170 ntBASIC17.96■□□□□ 0.47
CCDC116Q8IYX3 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC116Q8IYX3 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC116Q8IYX3 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.95■□□□□ 0.46
CCDC116Q8IYX3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC116Q8IYX3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC116Q8IYX3 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC116Q8IYX3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC116Q8IYX3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC116Q8IYX3 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC116Q8IYX3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms